Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01369 ATGATCCACATTTTTCGACCCTGTCTCATCCTCGTGGTGGGTGTGGTCATCGGAGCGGTGCTTATTGCAAACAAGAAGGATGACTCCGGTGCTGACAACATTGAACTTCATGATAAAGCCGTTGCCACAATGTGCCAAAACGTTCTCAACCAAACTCTTTGCCGTGACATCTTGGGCCCAGTGAAGGGAACCACAGACCCCAATGAATTCATTGCGGCCGCAGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAACATGAGTGACAGGCTAACAGTTGAAAAAGGAAACGGCAACCCAGGCATCAAGATGGCACTGGAGGATTGCAAAGACCTCTTGCAATCAGCCATGGACAGTCTCCAACTTTCAACATCGTTGGTGGACAGCAAGAATATCCAGACAATTCATGACCAGTCCGCCGACTTCAAGAATTGGCTAGGCGCTGTCATCTCCTACCAACAAACCTGCCTCGACAACTTCAACGAAACCGACAGCGGCGAGAAAGTCATCAAGGAACAGCTTAACGCAGAGACCCTAGACCAAGTTATGACCACAACAGGACTCACTCTTGATATCCTCGCCGACTTGGACAGGATCCTCGGCCAATTCAACTTGAAGATCGACGTCCACCCTGGCTCTCGCCGCCTTCTAGCCGCCGATGTCGATGACCAAGGGCTCCCGACCTGGCTCTCTGCCTCAGACCGGGACCTCTTGGCTGAAGTCGATGTCCACTTGGCTAAGAGACACCTCCTAGCGAAGGTAAAGGGCAAGGGTAAGGGTAAGGGTAAGGGCAAGGGCAAGGGAAAAGGTAAAGCTATTGCTGCTGGTGCCGCTGCTGGTGCTGTTGCGGGTGCTGCAGTTGGTGCTGCTGCCGGTGGTGATCAGGTTAAATTCTCTCCTGGATCCATTGAACCGGTGACCCGAGGACCAGCCCATGTGGTGGTTGCTCAGGATGGAAGTGGCCGATTCAGGACTATCAAGGAAGCTATTGATTCTTACCCACCTGGCTTCAAGGGTAGATACGTCATTTACGTTAAGGCTGGTCTCTATAATGAGTACATTATTATTCCTAAGCATGCTGTGAACATTCTTATGTACGGTGATGGCCCTACAAGGACTATTGTCACTGGTCGTAAGAACTTTGTTGAAGGCGTGAAAACAATGCATACCGCCACTTTTGCCAATACTGCTGATGGATTCATTGCTAAGGCAATGAGGTTCGAAAACACCGCTGGTCCGAAAGGACACCAAGCTGTGGCACTTCGAAACCAGGGAGACAAATCAGCTTTCTTCCAATGCCATATCTTTGGTAATCAAGACACCTTGTACGTCCAAACCAACCGTCAATTCTACCGAGACTGCGAAATCTCCGGCACCATTGACTTCATCTTTGGCACATCTCCAGCCTTGATCCAAAACAGCAAGATCATCCTGAGGAAGCCTGATGATAAACAATTCAACACTGTAACTGCCGACGGCACAACGCAACCCAACATGCCCACCGGAATTGTCCTCCAGAACTGTGAGATTGTCCCAGAGCCTGCTCTGTTCCCTGCGAGGTTCACCACCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACACTGATCATGGAATCAATGATCAGCGATGCCATTCACCCAGAAGGGTGGTTTCCTTGGGCTGGAACCGTGCACCTTGATACTTTGTGGTACGCTGAGTATGCAAATACTGGACCTGGTGCCAATGTTCAAGGAAGGATTAAGTGGAAGGGTTATCATGGCCTCATTAGTAGGAATGAAGCTGCACGCGAAGAAAATTCAATAGATAAACGTAAATAG 1830 0.4984 MIHIFRPCLILVVGVVIGAVLIANKKDDSGADNIELHDKAVATMCQNVLNQTLCRDILGPVKGTTDPNEFIAAAVKAATESVIKALNMSDRLTVEKGNGNPGIKMALEDCKDLLQSAMDSLQLSTSLVDSKNIQTIHDQSADFKNWLGAVISYQQTCLDNFNETDSGEKVIKEQLNAETLDQVMTTTGLTLDILADLDRILGQFNLKIDVHPGSRRLLAADVDDQGLPTWLSASDRDLLAEVDVHLAKRHLLAKVKGKGKGKGKGKGKGKGKAIAAGAAAGAVAGAAVGAAAGGDQVKFSPGSIEPVTRGPAHVVVAQDGSGRFRTIKEAIDSYPPGFKGRYVIYVKAGLYNEYIIIPKHAVNILMYGDGPTRTIVTGRKNFVEGVKTMHTATFANTADGFIAKAMRFENTAGPKGHQAVALRNQGDKSAFFQCHIFGNQDTLYVQTNRQFYRDCEISGTIDFIFGTSPALIQNSKIILRKPDDKQFNTVTADGTTQPNMPTGIVLQNCEIVPEPALFPARFTTKSYLGRPWKPYSKTLIMESMISDAIHPEGWFPWAGTVHLDTLWYAEYANTGPGANVQGRIKWKGYHGLISRNEAAREENSIDKRK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01369 609 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 199 IPR035513 -
Aip09g01369 609 Gene3D - 310 607 IPR012334 -
Aip09g01369 609 ProSitePatterns Pectinesterase signature 2. 457 466 IPR033131 -
Aip09g01369 609 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 171 IPR035513 -
Aip09g01369 609 PANTHER PECTINESTERASE 305 600 - -
Aip09g01369 609 PANTHER PECTINESTERASE 6 263 - -
Aip09g01369 609 Pfam Plant invertase/pectin methylesterase inhibitor 40 177 IPR006501 GO:0004857
Aip09g01369 609 CDD PMEI-like_3 43 199 - -
Aip09g01369 609 SUPERFAMILY Pectin lyase-like 311 599 IPR011050 -
Aip09g01369 609 Pfam Pectinesterase 313 599 IPR000070 GO:0030599|GO:0042545
Aip09g01369 609 PANTHER PECTINESTERASE 305 600 - -
Aip09g01369 609 PANTHER PECTINESTERASE 6 263 - -
Aip09g01369 609 SMART PMEI_2 36 193 IPR006501 GO:0004857
Aip09g01369 609 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01369 Aip-Chr9 23860407 23863558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01369 9 586 Carbohydrate Esterase AT2G47040 34.572 1.37e-111 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01369 K01051 - gmx:100808559 515.383