Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01368 ATGGCCGCAGGAAAAATCCTTGTGTCCGGTGTTTCCCTCATCCTGGTTGTGGGTGTTGCCATCGGAGTAGTTGTCGTCGTGAACAACAAGAGTAGCGATCCTTCATTAGCAGAACACCAAAGGACTGTGACTTCAATGTGCCAGGGGACCGATGATCCTCAGCTTTGCCAAGACACGCTCAAGGATGTTAAATCCTCAGGGTCGGATCCTAAGGCCTACATTGCGGCCTCGGTGGAAGCAACCACTAAGAGCGTGATTCAGGCTTTGAATATGAGTGATCGACTCTCAGTGGATCATGGCAGTCAAAGCCCGGGCATCAAGATGGCCCTTGATGACTGTAAAGATTTGTTGGAATTTGCCCTAGATAGCCTGGAGGCATCAGCAAATTTGGTCCGAGATAACAACATTCAAGCTGTTCATGATCAGACGCCTGATTTCAGGAACTGGCTGAGTGCTGTTATCTCGTACCAACAATCTTGCATGGAAGGTTTTGACGACTCGCAAGACGGCGAGGCCAAAGTGAAAGAGCAGTTGCATACTCAAAGCTTGGACCAGATGGGGAAACTCACTGCGATCACGCTTGATATTGTCACCGATTTGTCTAAGATCCTTGAAACTTTTGGGTTGAAATTGGATTTGAAACCTGCCTCTCGCCGCCTCATGGAGGCAACCGATAACAATGTGGATGCAGAAGGGTTCCCAGGTTGGATGTCTGCAGCGGATAGGAAGCTCATGGGAAATGGCGGCGGCGGCGGAGGTGGCAACGGTGCACCAAATGCGGTGGTTGCTCAAGATGGAAGTGGTCAATTTAGGACCATTAAGGATGCTATTAACTCATATCCTAATGGCTTCAAAGGAAGATACATTATCTATGTTAAGGCTGGGGTTTACAACGAGTATATTATCATTCCAAAGACTGCAGCGAATATTCTTATGTACGGTGATGGCCCAACAAGGACTATTGTCACTGGTCACAAGAACTTTGTAGATGGTGTCAAGACAATGCAGACTGCAACCTTCGCGAACACAGCGCCTGGGTTCATCGCAAAGTCAATGGCATTCGAAAACACCGCAGGTTGGGCAAAACACCAAGCAGTGGCGTTCCGAAACCAAGGAGACATGTCCGCTTTCTTCGACGTCGCCCTGCATGGTTACCAAGACACCCTCTACGTCCAAGCCAACCGTCAATTCTTCCGAAACTGCGAGATCTCCGGCACCATCGACTTCATCTTCGGCGCATCCGCCACCATAATCCAAAACTCCAGGATCATAGTTCGGAAGCCAGGTCCCAACCAATTCAACACCGTCACGGCCGACGGCACGGCGCAAAAGAACATGGCAACAGGGATCGTTATCCAGAACTGCGAGATCATGCCGGAGAGGGAACTCTTCCCCGACAGACTCTCAGTGAAATCTTACCTTGGTAGGCCATGGAAACAGTATGCAAAGACAGTGGTTATGGAGTCGAATTTGGGTGACCTTTTCTCACCTGATGGATGGGCTCCTTGGGCTGGATCCCAGTTTCTTAATACCTTGTACTATGCTGAGTACAACAACGTTGGACCCAGTGCTAATGTTCAAGGAAGGGTTAAATGGAAAGGTTACCACCCAAACATTGATAGGAACCAAGCTGCGGCATTCACTGTTGGACAGTTTCTCAAAGCGGGACCCACTGGTACTGCTGATGATTGGTTGAGGGCAACTGGCATTCCTTACGATGTTGGATTCACAAAATGA 1737 0.4911 MAAGKILVSGVSLILVVGVAIGVVVVVNNKSSDPSLAEHQRTVTSMCQGTDDPQLCQDTLKDVKSSGSDPKAYIAASVEATTKSVIQALNMSDRLSVDHGSQSPGIKMALDDCKDLLEFALDSLEASANLVRDNNIQAVHDQTPDFRNWLSAVISYQQSCMEGFDDSQDGEAKVKEQLHTQSLDQMGKLTAITLDIVTDLSKILETFGLKLDLKPASRRLMEATDNNVDAEGFPGWMSAADRKLMGNGGGGGGGNGAPNAVVAQDGSGQFRTIKDAINSYPNGFKGRYIIYVKAGVYNEYIIIPKTAANILMYGDGPTRTIVTGHKNFVDGVKTMQTATFANTAPGFIAKSMAFENTAGWAKHQAVAFRNQGDMSAFFDVALHGYQDTLYVQANRQFFRNCEISGTIDFIFGASATIIQNSRIIVRKPGPNQFNTVTADGTAQKNMATGIVIQNCEIMPERELFPDRLSVKSYLGRPWKQYAKTVVMESNLGDLFSPDGWAPWAGSQFLNTLYYAEYNNVGPSANVQGRVKWKGYHPNIDRNQAAAFTVGQFLKAGPTGTADDWLRATGIPYDVGFTK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01368 578 Gene3D - 254 576 IPR012334 -
Aip09g01368 578 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Aip09g01368 578 PANTHER PECTINESTERASE 4 576 - -
Aip09g01368 578 PANTHER PECTINESTERASE 4 576 - -
Aip09g01368 578 SUPERFAMILY Pectin lyase-like 257 572 IPR011050 -
Aip09g01368 578 Pfam Plant invertase/pectin methylesterase inhibitor 42 196 IPR006501 GO:0004857
Aip09g01368 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
Aip09g01368 578 SMART PMEI_2 38 196 IPR006501 GO:0004857
Aip09g01368 578 CDD PMEI-like_3 45 202 - -
Aip09g01368 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 199 IPR006501 GO:0004857
Aip09g01368 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 201 IPR035513 -
Aip09g01368 578 Pfam Pectinesterase 259 554 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01368 Aip-Chr9 23845885 23848718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01368 4 576 Carbohydrate Esterase AT2G47030 39.374 2.87e-132 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01368 K01051 - gmx:100789650 847.425