Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01353 ATGAATAGTATAAAAGTATGCACGGCAGCAGAAGAGGACGATACTACCTACCGCAAGGGATGCAAGAGGCTGCAAGGTGAGATTGGAGGAACTCCAGCGAACATGAGTGGTTGTTCTTCACTACAGCCAAGCCCACAGTCATCAGCGTTCCCAAGCCCTGTTCTTTCCTACCATGCTAGCCCAACTTCCTCATCATTCTCCAGCCCCTCTCGCATTTTCCCAACCTTCAAAACCCCTCTTCATTCCTCCGACCATTCATTCATAACATCACCTCCATCCCCACAAACCTTCCTCCTCTTACTTCCCCAACCTCCAGGGGTTCTAAAGGCGAATTTCGAATCCCTCTCCAATGTCTCCTCTCTTAATTCGTTCTGCCATCCTCTCTTCACGGTATCCGCCCCATCCAGCCCCTCCTGCCGCCACCAATTGGCTACTTCTACCATTCCTGAGTGCGATGAATATGATGCTTCCATTGTGGACTCCGGTCGCTGGATTAGTTTTCAGACAACGACTGCCTCGGCTGCTCTTTCATCGCCTACATTTAACCTTGGGAAACCAGCAATGCTGCCAGCAGATCACTCCCCAGGGCCCAGGGTTCCATGGATATGA 609 0.5107 MNSIKVCTAAEEDDTTYRKGCKRLQGEIGGTPANMSGCSSLQPSPQSSAFPSPVLSYHASPTSSSFSSPSRIFPTFKTPLHSSDHSFITSPPSPQTFLLLLPQPPGVLKANFESLSNVSSLNSFCHPLFTVSAPSSPSCRHQLATSTIPECDEYDASIVDSGRWISFQTTTASAALSSPTFNLGKPAMLPADHSPGPRVPWI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01353 202 Pfam BES1/BZR1 plant transcription factor, N-terminal 11 72 IPR008540 -
Aip09g01353 202 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 189 IPR033264 GO:0003700|GO:0006351|GO:0009742
Aip09g01353 202 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 10 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01353 Aip-Chr9 23344731 23346430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01353 4 187 BZR Transcription Factor Family AT1G75080 44.651 2.19e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Aip09g01353 BES1_N 4.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01353 K14503 - mnt:21397769 148.288