Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01340 ATGAGAGTTCATAGTGAGGCTGTTTCTTCCTCTCCAACGCCTGAGAGTAGAGACAAGAGACGGAGTCACCGGAGAGAGGCAGAGAGCAGATCAGCAGATCTTCTTCTTCTTCGATGCCTGAGAAAACCCGCCGTCCTCCGCCGAAGAGCAAAGCTCTTCTTCTTCTTCTTCGCCTCCGCCACCACTTGTCGTTGCAACGTCTTTGTCGGTCCCCGTTGCTGTGAGCCCGTCGCCAGATTCTGTCGCCGTCAGATTTTGACAATGGCAGCCAATGCTTCTAATGGAACAGCAAAGCAACCTCCTCAGCCATCTCCCTTGCGCTTCTCCAAGTTCTTTCAGTTGGCAGTGTTTGTTTCTGATAAAGTTCCAAACATTGTTATGGGAGATCCTGGGAGATTCAGACAAATAATAAAAAATCTTGTTGGCAACTCGGTTAAAGGAAGTGTATTTGTGGATGTGGACTTTGGTCTAGGTGTTGGAGGATATGATCTTGAGAGTGGTTCAACGGTTGTGGCTTGTGGGAAGTTATTGGATGGCAGTTCCTTCGTCATCGGATTCTCTGGAGTACTTGGCTTGTTAAGAATCCTAATTTACAAGGTATATGTGGATGGAACAACTACCATGTCTACTCATGAAAGGAAAGCTAGCATTAGAGAATTCTATGCGGTAATTTATCCATCTTTGTTACAACTTCAGAAAGGAATTACAGATTCAGAGGATAAGAAACAGAAGGCTGTTTGTATGGAGAGGTATTGA 756 0.4537 MRVHSEAVSSSPTPESRDKRRSHRREAESRSADLLLLRCLRKPAVLRRRAKLFFFFFASATTCRCNVFVGPRCCEPVARFCRRQILTMAANASNGTAKQPPQPSPLRFSKFFQLAVFVSDKVPNIVMGDPGRFRQIIKNLVGNSVKGSVFVDVDFGLGVGGYDLESGSTVVACGKLLDGSSFVIGFSGVLGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGITDSEDKKQKAVCMERY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01340 251 PANTHER RING FINGER PROTEIN 41, 151 188 251 - -
Aip09g01340 251 PANTHER PEROXISOME BIOGENESIS FACTOR 10-LIKE 188 251 - -
Aip09g01340 251 Gene3D - 97 161 IPR036890 -
Aip09g01340 251 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01340 Aip-Chr9 22693680 22695734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01340 109 156 Histidine Kinase Gene Family AT2G01830 65.385 1.78e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01340 K25840 - ahf:112730157 136.732