Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01338 ATGCTTCAAGCTGCCATTCTCACTGTAACTCGTCTCGTGTTGTTCTTCCGTCACGCAGCTGCTATTCCACTGCGTTGGTCCTGTTCCACCGCGCACCGGCCAATTCTCCTCTGCTCCTGTTCTGCTACACTCTACCCTCCTCTGCTCCAGTTTTGCTGTGCTCTACCCTTCTCTGCTCTAGTTCCACCGCACTCCAACCTCCATAGCTCCAGTTCTGCAGTGGTCCAGGCCACCACTTCTCTAGTTTCGCAGTGcttgcccgtctctacttctgtCACTACAAGACGGGCGGCAGATGGCGGTGCCATTTTAAAGGCGGTTTCTAAATCAGCCGCTATCTACCAATTTAGTAGCGATTATTGCAGTCATTTTGGAGAAAGCTACTCAAGTTTTGTGGCACCTCTTGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCGATACGACTTGTAGCTGTGGTGTCCCTCTTGCTTGGGAGTTTACTTTCTAGTGAGATCAGTGACACCAAAAGTCATTACTACGTGCGCCTTGCCTTAACTGCTACCTTCTTTGCAGGAGTCACTAAATTTGGTACTTGGAGTTTGCAGTATTGTGCTTTCATGAATGGTTATTGTAGGCTTGGTTTCTTCATAAATTTCCTATCTCATGCTGTCATTGTGGGCTTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGCATAAAGATGCAGAATTTGCCATAGTCCCTGTTTGGATTCAACTTTGGGGATTGCCGGAGCAATGCAAAACAAGGAGTCTAGGAAGGAGAGTAGGGGAGGCAACAGGTAAAGTTATGGAATCGGACCTATTTCAAATCAGGGGAAGGGAGGAGTGGCTTCTAAAAGTTAAAGTGGAATTGGATATTACAAAACCTGTTAGAAGAATTTTGAGGATCTCAGGCAGCAATCAAAAAGTAATTGAAGTGCAGCTGAAATATGAAAGAATTGGCAATTATTGTCATTATTGTGGTTTTGTAAGGCATGCAATACGAGCGTGCAGACAGAATTTAGAAGACTCGGAGAAAGGGGAAGTAAGGGAGGAGATGCGGGAGCCTTGGTTGAGAACTGAACAGGAAGGCAATGCTCGGGCTGACGAGATAACAATGAAGTACAGAGCAAACTACAAAAGAATGCAGAGAATAGGAGGAAGCAAGTGGTGGAAGAATGTGGAGCAACACAACAAAGAATGGGAGGTAATGGGAGTCTATTTGGCAACAGATGAAAATAGAAGAAGGGAGCAGTTTGCATATATCCTACATATGATGGAGGGAAGGAACAACAAAATAGTGATTATGGGAGATTTTAATGCAATAAAAGCGCACCCTGAGAAGCATGGTGGAAGAGATAAATCGAAAGCCTCAATTCAAGGCTTTAATGAGTTCATTAATGGAGGAAGGCTGATCGATTTAGGATTTGAAGGAGATCCATTCACATGGTGCAATAGGCAATTTGGAGGAAATTTAATCAAAGAGTGA 1497 0.4375 MLQAAILTVTRLVLFFRHAAAIPLRWSCSTAHRPILLCSCSATLYPPLLQFCCALPFSALVPPHSNLHSSSSAVVQATTSLVSQCLPVSTSVTTRRAADGGAILKAVSKSAAIYQFSSDYCSHFGESYSSFVAPLVYAFMGTSRDIAIRLVAVVSLLLGSLLSSEISDTKSHYYVRLALTATFFAGVTKFGTWSLQYCAFMNGYCRLGFFINFLSHAVIVGFMAGAAITIALQQHKDAEFAIVPVWIQLWGLPEQCKTRSLGRRVGEATGKVMESDLFQIRGREEWLLKVKVELDITKPVRRILRISGSNQKVIEVQLKYERIGNYCHYCGFVRHAIRACRQNLEDSEKGEVREEMREPWLRTEQEGNARADEITMKYRANYKRMQRIGGSKWWKNVEQHNKEWEVMGVYLATDENRRREQFAYILHMMEGRNNKIVIMGDFNAIKAHPEKHGGRDKSKASIQGFNEFINGGRLIDLGFEGDPFTWCNRQFGGNLIKE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01338 498 PANTHER SULFATE TRANSPORTER 128 236 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip09g01338 498 Pfam Sulfate permease family 128 236 IPR011547 GO:0016021
Aip09g01338 498 Pfam Zinc knuckle 294 341 IPR025836 -
Aip09g01338 498 SUPERFAMILY DNase I-like 398 493 IPR036691 -
Aip09g01338 498 Gene3D Endonuclease/exonuclease/phosphatase 373 496 IPR036691 -
Aip09g01338 498 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 128 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01338 Aip-Chr9 22677673 22684448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01338 128 236 Inorganic Solute Cotransporters AT1G22150 62.727 1.36e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01338 K17470 - ahf:112763740 178.333