Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01337 ATGGCTGTCAAAACCCGTTTCCAAGTGATTATGATGATGATCACTGTGTTCCTTCTTTCATCTTTATGCATCACTTTGGGAACCAAATTAAAAGTTGTTGGAGGTAGTGGTCCAGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAGACGGTGCTGGTGACTTCAAGACCGTTACAGATGCTGTTAATAGCATCCCTCAATGGAACAATAGGAGATTCATTCTGTACATTGCACCAGGTATTTATAGGGAGAAGATAATGATCCCAAGAACGCTTCCTTTTGTTACATTCTTAGGGGATGCTAGTGATCCACCAACCATTACAGGGAATGATACAGCTTCTATCCTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCTGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACAGAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACATTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTTGGCTCTGGCAGGTCTCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCCTGGGGCGATTATTCAACGGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTACCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCATTGGGATTCAATTCATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 897 0.4314 MAVKTRFQVIMMMITVFLLSSLCITLGTKLKVVGGSGPDLRLRDAESNKVRITVSQDGAGDFKTVTDAVNSIPQWNNRRFILYIAPGIYREKIMIPRTLPFVTFLGDASDPPTITGNDTASILGRNGKPIGTFQSATVAVDANYFLAINIKFENRAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKSQGVAKFFLDEPGAIIQRRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFIGIQFIEGDSWLISP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01337 298 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 229 - -
Aip09g01337 298 SUPERFAMILY Pectin lyase-like 50 295 IPR011050 -
Aip09g01337 298 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Aip09g01337 298 Pfam Pectinesterase 52 228 IPR000070 GO:0030599|GO:0042545
Aip09g01337 298 Gene3D - 239 297 IPR012334 -
Aip09g01337 298 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 250 296 - -
Aip09g01337 298 Gene3D - 36 238 IPR012334 -
Aip09g01337 298 PANTHER PECTINESTERASE 250 296 - -
Aip09g01337 298 PANTHER PECTINESTERASE 36 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01337 Aip-Chr9 22620803 22624528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01337 52 236 Carbohydrate Esterase AT5G47500 52.151 1.08e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01337 K01051 - qsu:112011696 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01337 09 22620803 22624528 Aip09g01337 09 22620803 22624528 ECH