Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01333 ATGGTTAAAGCCTTAGGGTTTTCCTTATTTCCTTACTTTACCTTTTCATTTTTTTGCGCTCCTCATCCGACCAGCTCCGGCGAACAGAACAGTGACCAGAGCGAACGGTGGAGAAGCGACAACTCCGTTTCATCTGTGTTTCTTCAAACTGATGATCCTCATTGGTCTTCTGCAATGGATGCCAAAGACATCTTGGGATTGCCTAAAAATTCGTTCCCTCCTCAGGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAGAGAAAACCCGATGGAATTTCCCGTGAGGTTTATGCGCTTACGGGTGGATTGGCACCACTTATGCCTGCTGTTGATTCCTCTCAATTGAAAAGAAGGCCTCCACCAGACGAAAAGGTCGCTTGGCAGTGGCTTGGTTTCACCAGTTCTGCTCGTAAAGATAATCTTCATCTTTATCATTGGGTCCGAGTTGTAAATGGTGTTCCACCAACTGGTGACTATTCTTTTGCCAAGTATAACAAGTCTGTTGACATTACAAGATACACAGATGAGGAATATGAGAAGTATTTGACAGATCCTAGGTGGACCAAGGAAGAGACAGATCAGCTGTTTGACTTGTGCGAACAATTTGATCTCCGATTCATTGTCATAGCTGATAGGTTCCCATCATCTCGGACTCTAGAAGAATTGAAGGATCGATATTATAGTGTATCACGGGCTTTATTAATTGCTAGGAATCCATCTTCTGTGGATATTGCAGCACATCCTCTTCTTAAGGAACCATATAATATTTCACGTGATGTGGAGAGGAAACGAGCAATGTCCCTGGTCCTCTCTCAAACAAGGCAACAAGAGCAAAGAGATGAAGAGGTTCTTGCTGAAGCAAAAAGAATAGCTCAGTCACGCATACCTGCTAAGGTTTCTCAAGAATCTGAGATGGCTGTTGCTCCAAATGCTGGTGTAGAAGTTACTGAGAGGACTATCCCGGGTGAAACTGTGTCTCCACCTCCATCGAATGCGCAACATCCACTGATACCTGTGCCGCCTCCATTGTCAACCGAGAATGCATCAACTCTGGCTTCTCTTCGCATTCTTCGTGTATATCTGAGGACCTATGCACTTGAGCAAATGTTGCAAGCTGCAAGCTCAACTGCTGGATTGCGAACTATCAAACGGGTTGAACAAACTTTGCAAGACCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCCGTTTGTGCTGAACATCTTGAACTAAGGAAAGAAATACTAACTTTGTTGAATCTTCAAAAGCAGCTGCAATATAAGGAGGCTGAAGGTTTACCTTTTCGTGAAGGGTCCTTCACTGAAACACCAGGAACACCAAAGGATAGAACATTTGTTCCTGACTCAAGTTTCGGAGTGGAGAGGACTGGCAAAAGGGACCAAAAGCGCAAGGCACCTGGAAGGCTTTCAGAAGCACCATCATCGCCAGCCCAGTCTAAAAGACCCAGAAAATTAAAGGCCTCTGATTTTTAG 1497 0.4462 MVKALGFSLFPYFTFSFFCAPHPTSSGEQNSDQSERWRSDNSVSSVFLQTDDPHWSSAMDAKDILGLPKNSFPPQEKKSRPPKESQRKPDGISREVYALTGGLAPLMPAVDSSQLKRRPPPDEKVAWQWLGFTSSARKDNLHLYHWVRVVNGVPPTGDYSFAKYNKSVDITRYTDEEYEKYLTDPRWTKEETDQLFDLCEQFDLRFIVIADRFPSSRTLEELKDRYYSVSRALLIARNPSSVDIAAHPLLKEPYNISRDVERKRAMSLVLSQTRQQEQRDEEVLAEAKRIAQSRIPAKVSQESEMAVAPNAGVEVTERTIPGETVSPPPSNAQHPLIPVPPPLSTENASTLASLRILRVYLRTYALEQMLQAASSTAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGLPFREGSFTETPGTPKDRTFVPDSSFGVERTGKRDQKRKAPGRLSEAPSSPAQSKRPRKLKASDF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01333 498 Pfam SANT/Myb-like domain of DAMP1 159 233 IPR032563 -
Aip09g01333 498 MobiDBLite consensus disorder prediction 437 498 - -
Aip09g01333 498 MobiDBLite consensus disorder prediction 461 475 - -
Aip09g01333 498 MobiDBLite consensus disorder prediction 76 91 - -
Aip09g01333 498 CDD SANT_DMAP1_like 187 229 - -
Aip09g01333 498 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 59 497 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Aip09g01333 498 Gene3D - 156 243 - -
Aip09g01333 498 SMART sant 183 232 IPR001005 -
Aip09g01333 498 MobiDBLite consensus disorder prediction 24 43 - -
Aip09g01333 498 MobiDBLite consensus disorder prediction 66 91 - -
Aip09g01333 498 PANTHER BNAA04G26950D PROTEIN 59 497 - -
Aip09g01333 498 SUPERFAMILY Homeodomain-like 183 233 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01333 Aip-Chr9 22504739 22515517 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip09g01333 SANT_DAMP1_like 3.5e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01333 K11324 - gmx:100818926 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01333 09 22504739 22515517 Aip09g01333 09 22504739 22515517 ECH