Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01328 ATGTATGAAGGCTATGCTATAGACTGGAGTCTTCTTGTTCCCGGAGTCGGAAGGCTTGTATCTGAATTCAATTCAAGAATGGCAGTTACACATGCTGATCTCGAACCAAACACAGGGAAGACATGTTTGATGAGCAGCAAAACTGGTGTATTCCTCGTACTTGTCACAATCCTATTGGGACTCTCCTCCTTCACTCTCTGCCTCATAACAAAAGCCACACGTTCTCAGGATCATGGGATTGGATTTATCACTCATTCATGGTGGACTTTAGTACCTTGCGGCCAGTTCTACTACTACTACTTTCTGCACTGTCAAAAAATATTAAAGAATAAAATTGAGGTTTGTGCTATGAAGTTTAATGTCCTTGTGACTACTTATGAGTTTATCATGTATGATCGATCAAAGCTTTCAAAAGTCGATTGGAAATATATCATAATTGATGAAGCACAGAGAATGAAGGATATGGATTCAGTCCTGGCCCGTGATCTTGATAGGAAAACTCCCAATATTCTAAACCAGGCAAGGAGTGGGTCCAAACTGTTTTTGATTGACCACGAGACGGAGTTCGTCCCGGCGATGCAAATGTTTGGGATTCCTTCGTCATGGTAA 609 0.4138 MYEGYAIDWSLLVPGVGRLVSEFNSRMAVTHADLEPNTGKTCLMSSKTGVFLVLVTILLGLSSFTLCLITKATRSQDHGIGFITHSWWTLVPCGQFYYYYFLHCQKILKNKIEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDMDSVLARDLDRKTPNILNQARSGSKLFLIDHETEFVPAMQMFGIPSSW 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01328 202 PANTHER SNF2/RAD54 HELICASE FAMILY 113 165 - -
Aip09g01328 202 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 168 IPR027417 -
Aip09g01328 202 PANTHER ATP-DEPENDENT HELICASE BRM 113 165 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Aip09g01328 202 Gene3D - 97 170 IPR038718 -
Aip09g01328 202 Pfam SNF2-related domain 114 160 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01328 Aip-Chr9 22411335 22415676 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip09g01328 SNF2_N 2.4e-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01328 - K11647 aip:107619011 352.058