Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01324 ATGGAGAAGGATAACATGGATTTGAAGAAGACTGAGGATGCTGTTGCTTTTGGATCCTCAAACGGTTATTATAATAATCCGTTGTTATTGTCGAGTGCGTTTGATTTCAGCTGTGAAGTGGAGAAAAGCTCGTTTATGGAGTTGCTGGGAGTGCAGGACTACTATAATAATAGTGGTGCTGTGCTTGATTTGCCACAGTTATCAAAAGCTACAGTTTTTCCTTTTACCACGGTTAACGCTTCTTGTGACGATACTGCTAAAGAGTGTTCTGAAGTGTTGAACCAGAAGCACCAACCTGCAACTCCGAATTCGTCTTCGATTTCGTCAGCGTCGAGTGAAGCTGTCAACGATGAACACAATAAAACTGTAGAACAAGATGATGATGATGATGATGATGATAGTGAAGAAGATGAAGGAGAAGAAGAGCAGCAGAAAAAGACTAAGAAAGAGTTGAAGGCAAAGAAGACAAAGCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGACGGTTACAGATGGAGAAAGTACGGTCAAAAGGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAGCGTGTGGAGCGGTCATTTACTGATCCAAGCGTTGTGGTAACTACCTATGAAGGCCAACACATACATCCAAGCCCAGTTATGCCTCGTTCAGCCATTGCCGGCGTTGGATCTCCGATGATGCCGCCGGCTGTCTCCACTGCCAACTTGGGTTCTCTCATGCCTGGAAACTACATGTCGCACTATCATCAGCATCGCCACCACCACCAACAACTACTAGTGAATACATTGTTCTCCTTGGGCATCCCTTACAACAATAGCAACAATATTGATAACTCTTCTTTTTCTCAAGACAATGGGCTTCTTCAAGATATTGTTCCTTCACACATGCTGAAAGAGAAGTAG 978 0.4387 MEKDNMDLKKTEDAVAFGSSNGYYNNPLLLSSAFDFSCEVEKSSFMELLGVQDYYNNSGAVLDLPQLSKATVFPFTTVNASCDDTAKECSEVLNQKHQPATPNSSSISSASSEAVNDEHNKTVEQDDDDDDDDSEEDEGEEEQQKKTKKELKAKKTKQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHPSPVMPRSAIAGVGSPMMPPAVSTANLGSLMPGNYMSHYHQHRHHHQQLLVNTLFSLGIPYNNSNNIDNSSFSQDNGLLQDIVPSHMLKEK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01324 325 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g01324 325 Gene3D WRKY domain 160 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g01324 325 PANTHER WRKY TRANSCRIPTION FACTOR 9 313 - -
Aip09g01324 325 PIRSF WRKY_txn_fact_IIc 1 325 IPR017396 GO:0003700
Aip09g01324 325 SUPERFAMILY WRKY DNA-binding domain 169 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip09g01324 325 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g01324 325 Coils Coil 134 161 - -
Aip09g01324 325 MobiDBLite consensus disorder prediction 123 140 - -
Aip09g01324 325 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip09g01324 325 MobiDBLite consensus disorder prediction 95 164 - -
Aip09g01324 325 MobiDBLite consensus disorder prediction 95 116 - -
Aip09g01324 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 313 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01324 Aip-Chr9 22321703 22323515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01324 99 325 WRKY Transcription Factor Family AT2G47260 54.733 3.55e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip09g01324 WRKY 7.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01324 - - aprc:113872234 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01324 09 22321703 22323515 Aip09g01324 09 22321703 22323515 ECH
Aip06g00717 06 9559475 9560819 Aip09g01324 09 22321703 22323515 PCT