Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01320 ATGTATTATTATAGTAATGGATTGTTTCAGGTGGAAGAGGACCCGATAACAAATGAGACCTTTGTTGCAGAGACGGAATCCGTTCCGATTGGTACTAGTCAGTCAACGATCAAAGAGATGTCATCGTTCTTGATGGAGAAGATGGATCCTAGACCAGTAACGCAATGCGGGTGTAATGCACTAATAAAAGTCCATGTTGACTTGAGGAACAGGCGATGGTACATGGAGTTCTTCTCCGATGAACATAACCATGACATGTTAGAGGCAAGGAGGAATAAGTACAAATGTCCTCTTGTGGTATTCTCTGGAGTGGATCACCATATGCGTACTGTTGTGTTTGGATGCGCAGTTCTCTCGAAGGAAGGGGAGGAAAGCTATATGTGGTTGTTTCGGGCATTTCTAGAGGCCATGAAAGGAAAGGCTCCTAAGGGTAAGTTCTTTGCTGGGCTTAAGATAACATCAAGGTGTGAGGCACTGAATATGCAGATAGGGAAGTTTATATACAACGGCTACAAGTTTAGGGAATTTATTGAGCATTTCCAACAATATTTAGAATTCATGCGTAGGAGAGTAGTGGTTGCTGATTACAAATCTGCTTATGGAGATCCGGTTGTGAAAACAAGATTGGAGGAGTTAGAGCGGTTTGTAGCAATAGTATACACAAGAGTTGGTGTGCTTGTTAGACTTAACATAGTTGTTATTCCAGATAGTCTTATACTAGGTCATTGGACAAAGAAGGCAAAACAACCGCCGATAAATAACCATGTTTTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATACGGCAATGCTCGATGACTATAGAGAACTAGTCAAGCTTTCTTGTAGTTACTTTGATGATTACTTCGAGGTGAAGACCAAAATAGCTAATGAACAAGAAGCGTTAAGAGAAAAGATCCAGAAAAGGTTGGCCACCACTGCCGAAGGCGGGGGCGATGATGCGTCCATACATGGTCCTCCGAGAGCCAGGCATAAAGGGTGTGGTCGTCATGTTGTGACTACTCGTGGGAGGTATCGGCGTGTCCAACGATGCAGAAAGTGTGACAAAGCTGGCCATAATGCTCGTAGATGTGTCGACAGAATGGTGACGACACCACAGATGAATTACATGCCATGGGATCATCGTACAACATGGACGAATCACAAGAAGTTGAGGCTTCGCAACAGATGGAATACGATGGTCTGA 1215 0.4354 MYYYSNGLFQVEEDPITNETFVAETESVPIGTSQSTIKEMSSFLMEKMDPRPVTQCGCNALIKVHVDLRNRRWYMEFFSDEHNHDMLEARRNKYKCPLVVFSGVDHHMRTVVFGCAVLSKEGEESYMWLFRAFLEAMKGKAPKGKFFAGLKITSRCEALNMQIGKFIYNGYKFREFIEHFQQYLEFMRRRVVVADYKSAYGDPVVKTRLEELERFVAIVYTRVGVLVRLNIVVIPDSLILGHWTKKAKQPPINNHVFSGEIPDAAYMSMHTAMLDDYRELVKLSCSYFDDYFEVKTKIANEQEALREKIQKRLATTAEGGGDDASIHGPPRARHKGCGRHVVTTRGRYRRVQRCRKCDKAGHNARRCVDRMVTTPQMNYMPWDHRTTWTNHKKLRLRNRWNTMV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01320 404 MobiDBLite consensus disorder prediction 315 337 - -
Aip09g01320 404 Pfam MULE transposase domain 91 143 IPR018289 -
Aip09g01320 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 144 IPR031052 GO:0006355
Aip09g01320 404 ProSiteProfiles Zinc finger CCHC-type profile. 353 367 IPR001878 GO:0003676|GO:0008270
Aip09g01320 404 Pfam FAR1 DNA-binding domain 39 87 IPR004330 -
Aip09g01320 404 PANTHER OS02G0262500 PROTEIN 90 144 - -
Aip09g01320 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 86 IPR031052 GO:0006355
Aip09g01320 404 PANTHER OS02G0262500 PROTEIN 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01320 Aip-Chr9 22110789 22114423 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01320 MULE 7.4e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01320 - - adu:107488338 267.7