Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01317 ATGGTGAGCGAGCGTTTCTCTTCAACAGGTTTCAATCTCAACGGAATCCTTGACGGTTATGGTTCAATACAAGAAGAGCATGTTGAGTTTCGAGTGGAAGACACCACCAACACCTCAACAATAACGGAATTTCTTGGAGACATGAATAACAATAATCCAATCTCTTATAATGAGAAAAACGAGCCCCAGCAACATGATGATTTCAAGTTTGATAACTTGGTGCTAGAAGAGTTCAGCTTTTACCCTGATCCACATCAAAAGACACAACCATTATTATTGCCACAAAAGAATAATAATAATCAATCGTTAGTCAGAAAAACAAGTTCGGTTGAACCACCACGGTCGCCACCTCCGCCTCCTTCATGGGAGCTCCTCTGCAGTTACGGAAGCAGGATCCAGAGGTTAGGACGGAGAAACTTAAGCGGCGCCAGCGAAGAAGCGAAAACTAGCACTAGCATTAGTCCCCAGAAGTTATCAACAGAGGAAATAGTAAGATTGGCAGGAGCAAGGTATGTGCAATACTCTTCACAATGGCAAGATAATTGGTTCATGCCAATGCATCCTTATGCTCAAATTGGTTTCATGATTTTGTCTGAAGAAGAAAATAGGGACATTGACCTTGCCCAATTTCTCCTAGCTTCAGCTGATAAGATTGGGTGCCAACAATTCGAGCGTGCAAATTCATTGCTCCTTCAATGCCAATGGAATTCATCAAATCTTGGGAACACAGTTCAGAGACTCGTCTTTCATTTCTCTTGCGCACTAAAAGAAAGGCTGAATAGAGAGATAGGAGGGATGGTGTTAGAGAGGAATTCGCAGAGGGAACTGGTTGAAGCAATGCAAATGGATCATAACTCGGCGATTGCATGCCATCAAAAGCTTCCTTTTAATCAAGTGATGCAATTTGTTGGTGTGCAAGCTTTGGTTGAGCATGTTGCATCAAAAACCAAAATCCATTTGATAGATCTTGGGCTTGGATATGGGCTGATGGCGACAGTTCTTATGCAAGCTCTGGCAGAGCGAAGCGAAAAGCCGGTCGAGCTTGTGAAGATAACTGCCGTTGGATGTGGAAGCAAGAGGGTGCTAGATGAGGCAGGGAGGAGGTTGGTGAGTTTTGCCAAGTCCTTGAAGTTTCGCATTTTGTTTAAGACAGTTTTTGTTGAAGACATTACAGAATTAAGGGAAGATCATTTTGAGATTGAAAATGATGAAGCTGTGGCCGTGTACTCTCCCAATACCCTGAGGATTTTGGTGCCAAGTCCTGATTCCTTGGACAACTTGATGAGGGTGTTAAGGAAGATTAAACCGGCTATTATGGTTGTTGTTGAGATTGAAGCAAACCACAACTCCCCTTTATTTGTGAATCGATTCATTGAGTCCTTGTTTTTCTTTTCAGCATATTTTGATTGCATTGAAACGTGTCTAAATCAGGAGAATGAGTGCAGGATGAGATTAGAAGCAATATTATCTGAAGCAATACGAAACATTGTTGCATTGGATGACAAAGAGAGAGCAGCTAGGAATGTGAAGATACATGTTTGGAGAAGGTTTTTTGCGAGATTTAGAATGTTTGAAACTGAATTTAGTGAGTCATCGGTATACCAAGGTAATTTGGTTATTAAAAAGCTTGGTTTGAGTAACATTTGCACGTTAGATAAGAATGGAAAGAGTCTTATCATTGGATGGAAGGGGACCCCAATTCACTCCATCTCAGCATGGAAGTTTCTTTGA 1731 0.4154 MVSERFSSTGFNLNGILDGYGSIQEEHVEFRVEDTTNTSTITEFLGDMNNNNPISYNEKNEPQQHDDFKFDNLVLEEFSFYPDPHQKTQPLLLPQKNNNNQSLVRKTSSVEPPRSPPPPPSWELLCSYGSRIQRLGRRNLSGASEEAKTSTSISPQKLSTEEIVRLAGARYVQYSSQWQDNWFMPMHPYAQIGFMILSEEENRDIDLAQFLLASADKIGCQQFERANSLLLQCQWNSSNLGNTVQRLVFHFSCALKERLNREIGGMVLERNSQRELVEAMQMDHNSAIACHQKLPFNQVMQFVGVQALVEHVASKTKIHLIDLGLGYGLMATVLMQALAERSEKPVELVKITAVGCGSKRVLDEAGRRLVSFAKSLKFRILFKTVFVEDITELREDHFEIENDEAVAVYSPNTLRILVPSPDSLDNLMRVLRKIKPAIMVVVEIEANHNSPLFVNRFIESLFFFSAYFDCIETCLNQENECRMRLEAILSEAIRNIVALDDKERAARNVKIHVWRRFFARFRMFETEFSESSVYQGNLVIKKLGLSNICTLDKNGKSLIIGWKGTPIHSISAWKFL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01317 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 574 IPR005202 -
Aip09g01317 576 Pfam GRAS domain family 208 574 IPR005202 -
Aip09g01317 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 55 574 - -
Aip09g01317 576 Coils Coil 576 576 - -
Aip09g01317 576 ProSiteProfiles GRAS family profile. 198 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01317 Aip-Chr9 22060923 22062653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01317 195 575 GRAS Transcription Factor Family AT1G66350 26.702 8.66e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip09g01317 GRAS 7.2e-73 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01317 - - aip:107615215 1125.92