Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01297 ATGGCTTCAGTTTACCGCAATTCGAGCTCAGGATCGGAGGGCGGAGAGCCCGTGATGGATGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGCGGCGGTCGCGGATGAGGAAGCAAAAGCAGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAGATGAAGGAGGAATCTTATGCAGAGATTGAATCCTCAAACGGCGTCATCAGGGCTCAGATCACGGAGCTTGGGGACAGGCTTAAGTTCCTCAATTCCATCCTCGAAATTGCTGAAGTCGTAAGCGGCGGTGAGCTCTCCGTTGATTTACCGGAGATTCTGGATCCTCTCATGAAGCCTTGGCAGATTCCTTACCCATTTCAGCCAATCATGGCTTCGGCAGACATGTTCCTGCATTGA 504 0.3948 MASVYRNSSSGSEGGEPVMDERKRKRMLSNRESARRSRMRKQKQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMKEESYAEIESSNGVIRAQITELGDRLKFLNSILEIAEVVSGGELSVDLPEILDPLMKPWQIPYPFQPIMASADMFLH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01297 167 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 46 - -
Aip09g01297 167 PANTHER BZIP TRANSCRIPTION FACTOR 44 89 165 - -
Aip09g01297 167 Coils Coil 89 93 - -
Aip09g01297 167 Coils Coil 38 45 - -
Aip09g01297 167 PANTHER BZIP TRANSCRIPTION FACTOR 53 89 165 - -
Aip09g01297 167 CDD bZIP_plant_GBF1 23 45 IPR045314 GO:0003700|GO:0006355
Aip09g01297 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Aip09g01297 167 MobiDBLite consensus disorder prediction 1 43 - -
Aip09g01297 167 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 46 - -
Aip09g01297 167 MobiDBLite consensus disorder prediction 16 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01297 Aip-Chr9 21619178 21619681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01297 18 165 bZIP Transcription Factor Family AT3G62420 45.270 1.44e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01297 K25786 - gmx:780550 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01297 09 21619178 21619681 Aip09g01297 09 21619178 21619681 ECH
Aip06g00692 06 9211976 9213543 Aip09g01297 09 21619178 21619681 ECH
Aip06g00692 06 9211976 9213543 Aip09g01297 09 21619178 21619681 PCT