Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01281 ATGGTCGGTCGTCATCTGGCGGTCGTGTGCGTGGCCAGGTCGTCGTCGTCCGTCCCCTGCTCAGTTGTGACCGTCGCCAGCTGCCCATCTGCTGTGGCTGTCCCACAAATCTGTTGCTACGGCACAGGCATCTGGTTCTTTGTTTCCGCGCTACTGCCACCACCCCTGCTCAACTGCTCCTTCCCCTATTCCGAAGCTCAGATGGATGCGGTGCATAACCATGGTGGTGAGGGAAAAAATAATGAAGAAAACGGGCGCTATGATGAGGCGGTGGCGGAGGACCCTTTGAATGATACTACTGGAAGCGAAACAGAAAGTCAAACGTGTTTGGATTTTGGAGATGTTGAGGGTGTGACTGTTGAAGATATTATGCAAAAGACCTTTAGAACTGATGATGATGCGTATGAGTTCTACAAAAATTTTGGTAGGTATCATGGGTTCGGTGTCCGAAAAGGGGACTCACGAAGGGACGATGATGGAAATGTTAGGAGGAGGAGATTTTTTTGTAATAAGGAAGGATTGAGAGATCCCAAGCACTATAATAGACTGGATAGGATGCGAGTACATAAACCTGAGACGAGAACTAATTGTAAGGCGAAGTTTTCTATTCACCTAGATAAGAGTGCTTCCATATGGCGAGTAAGGAAGATCAACAACAACCACAACCATGAATTGACTCCCCAGGTAATGGTGCACCTAATCCCAAAGTATAGGTCATTGACTGAAGGGGCGAAAGCACAAATTGATGGATTCCGTGAGTGCGGGATATCGACGGCAAAAACAATGCGATATATGGCAGGATTGGCGGGTGGGTATTCATTGGTAGGATTTTTAAAGAAGGACGCGTACAATTATATTGACAAGCAAAGGCGCGAGCAAATTGTTGACGGAGATGCTGAATCTGCGATAGCCTACCTAGAAGGAAAGGCAGAGGCTGATCCCATGCTGATGGCACGGTATAATTTGACTGATGATAGAATGCTTGCAAATATGTTTTGGGCTGACGGGGGAAGTCGGTTGGACTACCAATATTTTGGAGATGTTCTGGCTTTCGACTCTACTTACAAAAAAAAAGTACAACAGACCACTGGTTATTTTCTCAGGATCAAACAATCACAAGCAGACCACGATCTTCGGCTTTGGGCTAGTGTTGGATGA 1158 0.4655 MVGRHLAVVCVARSSSSVPCSVVTVASCPSAVAVPQICCYGTGIWFFVSALLPPPLLNCSFPYSEAQMDAVHNHGGEGKNNEENGRYDEAVAEDPLNDTTGSETESQTCLDFGDVEGVTVEDIMQKTFRTDDDAYEFYKNFGRYHGFGVRKGDSRRDDDGNVRRRRFFCNKEGLRDPKHYNRLDRMRVHKPETRTNCKAKFSIHLDKSASIWRVRKINNNHNHELTPQVMVHLIPKYRSLTEGAKAQIDGFRECGISTAKTMRYMAGLAGGYSLVGFLKKDAYNYIDKQRREQIVDGDAESAIAYLEGKAEADPMLMARYNLTDDRMLANMFWADGGSRLDYQYFGDVLAFDSTYKKKVQQTTGYFLRIKQSQADHDLRLWASVG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01281 385 Pfam FAR1 DNA-binding domain 136 226 IPR004330 -
Aip09g01281 385 PANTHER OS02G0262500 PROTEIN 121 356 - -
Aip09g01281 385 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Aip09g01281 385 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 121 356 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01281 Aip-Chr9 21203686 21206416 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01281 FAR1 7.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01281 - - ahf:112778607 522.316