Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01280 ATGCGAGGAAGGAGACGATGTTTACGTCACTGCCGCCAAATCTCACCACCGCTGCTGGAGCCTCTGGCCGTCGGGACCGCCTTTCTTACCACCGCTGATGAAGCTCATCGGAGTTGCTCGAAGGTTACTGTCGCTCTATTTGGTTTTGTTGGAAGCTGCGCTGCTGCAGGTGTGATTGCCGAAAACTGCCGCCGGAACCCTGTCTTCTTGGTTGGTCGGTTAGATGGTATGCAGCAGTTGTACATTCACAGTGATGATGGTGGATATGGGTTCTGTGTCAAGTTGTGTTGTGTTGGTTCCCTTGTGAATATGATGCCAAAAAAAGATGATGATGGCCGCATTCAAATTTTCTTTACTGGCGCCAAATTGGCTATAAGTGAAACGTATCAAGGGACTGATTCTCAATTTCTGGATTCTGAAAAAGACACTTTCTGGGATGATGGCTCTACTATTTCAACCGCTGTTTTAGTTGATAACCATCTCTATGTTGCTAATGTTGGAGATTCTGGGACTATAATATTGAAAGCTGGTAAAGCAATTGCTCTCTCAGGATCACAAGCCAAACAGAAGTGA 573 0.4607 MRGRRRCLRHCRQISPPLLEPLAVGTAFLTTADEAHRSCSKVTVALFGFVGSCAAAGVIAENCRRNPVFLVGRLDGMQQLYIHSDDGGYGFCVKLCCVGSLVNMMPKKDDDGRIQIFFTGAKLAISETYQGTDSQFLDSEKDTFWDDGSTISTAVLVDNHLYVANVGDSGTIILKAGKAIALSGSQAKQK 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01280 190 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 117 184 - -
Aip09g01280 190 SUPERFAMILY PP2C-like 119 183 IPR036457 -
Aip09g01280 190 Gene3D - 21 189 IPR036457 -
Aip09g01280 190 Pfam Protein phosphatase 2C 124 183 IPR001932 -
Aip09g01280 190 PANTHER ALPHABET, ISOFORM E-RELATED 117 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01280 Aip-Chr9 21193149 21194035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01280 117 183 PP2C-type Phosphatase Gene Family AT5G53140 73.134 1.90e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01280 K17506 - adu:107488705 110.538