Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01273 ATGTCCTTCAATCAATCAAAGACCAATAGAAGCACAGCAGTGTACCGAAAATCTGAGCGATCCACCAGTTTCAATCAGCAACAAGGTTCCTCATTTGCCTACGGCGGTGGCGGCATTAAGCCAACGCCATCGATTCCCTCATCTCCATCACTCTCCTCTAACGAGAGGTTTAACAAGAAGTCTAGCGATGCACAAGTTGGACAATCTAGAGTAAACCCCACCCCACTGAATGTAATAGAGTCTAACAGTGGTTCTGCTGCTCGAAACATACAGAATCGTGCCCATGTGCAACCTCAATTGCATGGAGCATCTGATGCTCCAGCTACTACCAAGCCATGTGAATCATCTGCTGTACAAGGGAGTACTGTAACTATTCCAAAAGTTCCAAGTTCTCAACTGCCCCCTGCAACTTCTGATCCAATTACTCCTGAAACTCCTACTAAGGGAGATGCATCAAAGTCATTCCCTTTCCAATTTGGATCTATTAATCCTAGCATTATGAATGGGATGACAGGCCCTACTAGTATAAGCTCAGCTCTTCCTAATATAGATGAGCAGAAGCAGGATCAGGCTTCAGTGCCAACATCTCTTATTCCAAAACAACAACTATCACCAAGAAAAGATGCAAGTGTCATTGAGCAGTCTATTGGTGGGGAAACTAATATACAAACTAAGGCAAAAAAGGATCTTCGCGTGCCAACTGCAACCTCAGCAAACCAAATGCAGAATCCTTCTATTATTCCTATAACTGGGATTTCAAACTCAACACCATATCACCTGTCACGAGCATCTTTACAGTTTGGTAGTTCTAATCCACATATTCAATCTCAGGGGTTGCCTACAACATCTCTCCAGATGCCTATACAAATGGCTTTGCCAATTGGAAATACTACACAAGTGCAACAACCAATTTTTATTCCAAGTCTTCAACCTCGTCCAATGCAACCTCAGGGGATCATGAATCAAGGTCAAAACATGACTTTTACTCCTCAAATGGGGCATCAGTTGTCACATCAATTAGGCAATGTGGGTATTAGTATGATTCAACAATATCCCCAACATGGACAAAAATATCAACCTGGTCCTCGAAAAACAACTCATGTGAAGATCACTCACCCCGAGACTCATGAAGAGTTGAGACTTGATAAAAGAGCAAATGCATATTCAGATGGGTCATCTAATTCTAGGTCACATCCTAATATCCCTTCTCAATCCCAACCTGGTCAATCTTTTGCAGCTTATCCAATGAATTATTATTCCCCCAACTCTTATAGTACTAATTCTCTCTATTACCATCCTCCCAATCCTCTCCCACTAACAAGTAGCCAAAATACTGCTAATTTGCAACCACAAAGATTTAATTATCCATTGAATCATGGTTCGCAAAATGTTGGTTTCTTGAATTCAATGCAACATAGCTCTCTATTTGCTAATAAAACAGGTGCTTCTATTCTTGGTAGTGTTGAACCCCCAATTTTAGAAAATTTTCATGATATTCCTAATTTAATGTCATTAACTGGAGCTGCTCCTGTGACAATTAGACCATGTGATGCATCTGATGTTGTAGACACATCATTGTCCAATTCTGGTAATTCTGGCGTTCAAAACCGAGAACCCAATATTTCGGTAGCATCACGTGATTCTGGCTCCCCTGCATTACAAAATGTATCTGAAACTAGTCCAGAAATTTCTTCACAGCAATCAAAATTATTTGGTAACTCTTTTGTGCAACAAAAACAATCACCTGGATCTGTTTTTGTATCTATTGAGAAGCTTGCAGCCACTCCCTTGTCACAACCTTCATCAGTAATGACTGAAGATCATGCCTCACTTGTGTCTAGAAGGAAGGAAGCTCTAACTAGGTCAAATTCTTTGAAGGAAAATCCAAAGAAACTAGAGAAGAGCGCCCAATCACATCATCAGGCAGTTTCTATTCAATCTCCATCAATGGATAATGTTGCTTATCAAGCTATTGATAATGATATGCAGTCAGTTGATATTCTGGAGACAACTTCAAATCATGTCAAGAATAGTTCAGATACTTTTTGCAATGACTCTCTGTCTTTTTTGACATCTAGTGCCAACGATAAACCAATTTCAGAACCAAATAAAGTAAAAGCTACATCTAAAGGTAATAAGAAAAGAAGAGAGATTCTTCGAAAAGCTAATGCTGCTGGGTCAACTTCTGATCTTTATAACGCATACAAGGGACCAAAGGAAAAGAAAGAAACTGTTTTCAGTTCAGAAAGCACAAACAATGCTTCTTCATCTGAAAGTTTGAAGCAGGTATCTACAGATGCTGCTCACCTAGATCTTAAAGTGAGTGAGAAATGTCAACAGAGTAAAGTTGAGCCTGATGATTGGGAGGATGCTGCTGACATGTGTACATCAAAACTGGAAGTTGATGACAAATTTCAACTGATTAGTGATGTTAACAGAGGTGTAGCCAAGAGGTACTCTCGAGATTTTCTTTTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAGGTTTTCAGATCACAGTTGACATAGCTGAGGCTTTAATGAGTTTTACTATTGTAGATAGGCCTAGTGGAATGCCTTGGATGGATTATTGTGGAACTGGTGTAAATGAGGAAGAGAGGTGGAGTAAATCTTCTAATACTTTTCATTCTGGAAGACGTGGTTTGGATGTTGGTGGAGGTAATGTAGGTTTTCGATCTGGTCCAGGAAACAATTTTGGTGCTTTAAGGAACTTTCGTGGAGAGACACCTATGCAATATGCTGGAGCAGGGGTCCTTTATGGACCAACGCAATCCATGGGAATTCCAAGTGGAATGCAAAGAAACAGTAATGGAGAAAGGTGGCAGCGTTCTGTTAGCTTCCAGCACAAGGGGTTAATTCATTCTCGTACTCCTCAAACTCCTTTACAGACGATGCACAAGGCTGAGAGGAAGTATGAAGTGGGTAAAGTTTCGGATATAGAAGAGGCAAAACAGAGGCAGCTGAAAGCTATCTTGAACAAATTAACTCCTCAGAATTTTGAGAGGCTCTTTGAACAGGTAAAAGTGGTTAATATTGACAATGCTATCACACTTACTGGTGTCATCTCACAAATTTTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTTACATTTGGCTTCTGAGTTGCCTGATTTCGGTGAGGACAATGAAAAGATAACTTTCAAAAGATTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGAGGTGAAAGAGAGCAAGAAGAAGCAAATAAGGCTGATGAAGGTGAAGTTAAGCTATCTGATGAAGAAAGGGAAGATAGAAGAGTCAAGGCAAGAAGACGCATGCTAGGTAATATTAGATTAATTGGTGAGCTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTCGGTCAATATCAGGATCCTGATGAAGAAGATATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGACATGATTGATCATCCCAAAGCCAAAAAACATATGGATGCATACTTCGAAAGGATGAAACTATTGTCAGACAACATGAATTTATCATCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGGGAAAATAAATGGCAACAAAGGAGAAAAATTGAAGGTCCAAAGAAGATTGAGGAAGTGCATAGAGATGCGGTGCAAGAGAGGCAGGCCCAAGCTGGTAGGTTAGGTCGTGGTCCAAGCAACAACCAAACATCAAGAAGAAACCCTATGGACTTTCGTCCAAGAGGATCTCTGGTGTCATCTACAACTGCTCAAATTGGAGTACCGCATGGGTTACCTGGTCAAGTTCGTGGGTTTGGTTCTCAGGATGCTTGTTCTGAAGAGAGGCAATCTTTTGAGGCTAGGACCTTGTCTCCAAGAGCCTTGGGGGATGATTCTATTACCTTGGGACCCCAGGGCAGTTTGGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATAAGTTCATCGATGCCTAATGCAATTCCTACCTCAGTAGACTCTTCCAAAGCAACTGATGTTCTTAACGGTTATGGGAATTTATCAGAGCATGCACCATACCTTACGGACAGGTTTTCAGGTCCAGCTGCTTATGATCAATCAAGTGCTCTAGAGCATAATATAGGCTTAGACAAAAAAGATTTGAGTACTTCATATCGGAGACTTGACAACCTTGTTGCAACTTCACCATCTGATCAATTGCAAGGGTCAATAGTTTCTCAGGTTCCTTCTTCAGAAAAGGTTCGGTCAGAAGAACAACTCCGAGACATGTCCATGGCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAAGGAAGTTGCTCTATGTGTCAAAGAATTAAATTCTCCATGCTTCCATCCTTCCATGGTTTGTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAACGAGACCTTTTGGCCAAATTGCTAGTTCACCTTGTGAAATCACATGATGGTATCTTGAGTCAAGCACAGCTTATCCAAGGGTTTGAGTCTGTTCTCTGTACATTGGAGGATGCTGTTAATGATGCTCCCAAAGCACCAGAGTTTCTTGGACGTGTTTTTGCGAAAGTTATAATAGAGTCTGTTATCTCTTTGAATGAGATTGGGCGGTTATTACGTGATGGAGGGGAGGAACCAGGCAGCCTCTTAGAAACTGGACTTGCAGCTGATGTTCTTGGAAGTACCTTAGAGgagacattcagtgagcttcctcagggcgcagacgatgctacgattaggagAGCTCCACGTGGAGGAAGAGGCAAGGATGATGATGATGATGATGATGGTCACGACAGTGGTGATGGTGAGGACGATGGTGGAGATGATCCTGGAGATGATGACGGCGATGGTGGACACGATGGTGGATTTGATAGAGGAGGACACGATGGTGGAGATGATGTTGGAGTTGGTGATGGTGGTGGAGTAGGATATAATGGTGGAGTTGCTGGTGGTATGAGTAGTGGTGGGTTTGAAGGGGGTGgcggagcacctagtacatcacagctcagtcTATCCACAACACAGGTTGGCACACCGGAGGAGGTGCCCCCACATTCCGGTCCATCGACGTCACAAGAGTACATACCAAACGAGATGAAGCATCATGGCGACCGGGATGAAGATGAGGTCCCTCTAGCCTAG 5208 0.4111 MSFNQSKTNRSTAVYRKSERSTSFNQQQGSSFAYGGGGIKPTPSIPSSPSLSSNERFNKKSSDAQVGQSRVNPTPLNVIESNSGSAARNIQNRAHVQPQLHGASDAPATTKPCESSAVQGSTVTIPKVPSSQLPPATSDPITPETPTKGDASKSFPFQFGSINPSIMNGMTGPTSISSALPNIDEQKQDQASVPTSLIPKQQLSPRKDASVIEQSIGGETNIQTKAKKDLRVPTATSANQMQNPSIIPITGISNSTPYHLSRASLQFGSSNPHIQSQGLPTTSLQMPIQMALPIGNTTQVQQPIFIPSLQPRPMQPQGIMNQGQNMTFTPQMGHQLSHQLGNVGISMIQQYPQHGQKYQPGPRKTTHVKITHPETHEELRLDKRANAYSDGSSNSRSHPNIPSQSQPGQSFAAYPMNYYSPNSYSTNSLYYHPPNPLPLTSSQNTANLQPQRFNYPLNHGSQNVGFLNSMQHSSLFANKTGASILGSVEPPILENFHDIPNLMSLTGAAPVTIRPCDASDVVDTSLSNSGNSGVQNREPNISVASRDSGSPALQNVSETSPEISSQQSKLFGNSFVQQKQSPGSVFVSIEKLAATPLSQPSSVMTEDHASLVSRRKEALTRSNSLKENPKKLEKSAQSHHQAVSIQSPSMDNVAYQAIDNDMQSVDILETTSNHVKNSSDTFCNDSLSFLTSSANDKPISEPNKVKATSKGNKKRREILRKANAAGSTSDLYNAYKGPKEKKETVFSSESTNNASSSESLKQVSTDAAHLDLKVSEKCQQSKVEPDDWEDAADMCTSKLEVDDKFQLISDVNRGVAKRYSRDFLLKFAEQCTDLPEGFQITVDIAEALMSFTIVDRPSGMPWMDYCGTGVNEEERWSKSSNTFHSGRRGLDVGGGNVGFRSGPGNNFGALRNFRGETPMQYAGAGVLYGPTQSMGIPSGMQRNSNGERWQRSVSFQHKGLIHSRTPQTPLQTMHKAERKYEVGKVSDIEEAKQRQLKAILNKLTPQNFERLFEQVKVVNIDNAITLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFGEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSDEEREDRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGDMIDHPKAKKHMDAYFERMKLLSDNMNLSSRVRFMLKDAIDLRENKWQQRRKIEGPKKIEEVHRDAVQERQAQAGRLGRGPSNNQTSRRNPMDFRPRGSLVSSTTAQIGVPHGLPGQVRGFGSQDACSEERQSFEARTLSPRALGDDSITLGPQGSLARGMSIRGSTAISSSMPNAIPTSVDSSKATDVLNGYGNLSEHAPYLTDRFSGPAAYDQSSALEHNIGLDKKDLSTSYRRLDNLVATSPSDQLQGSIVSQVPSSEKVRSEEQLRDMSMAAIKEYYSARDEKEVALCVKELNSPCFHPSMVCLWVTDSFERKDTERDLLAKLLVHLVKSHDGILSQAQLIQGFESVLCTLEDAVNDAPKAPEFLGRVFAKVIIESVISLNEIGRLLRDGGEEPGSLLETGLAADVLGSTLEETFSELPQGADDATIRRAPRGGRGKDDDDDDDGHDSGDGEDDGGDDPGDDDGDGGHDGGFDRGGHDGGDDVGVGDGGGVGYNGGVAGGMSSGGFEGGGGAPSTSQLSLSTTQVGTPEEVPPHSGPSTSQEYIPNEMKHHGDRDEDEVPLA 1735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1246 1279 - -
Aip09g01273 1735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 691 1591 - -
Aip09g01273 1735 SUPERFAMILY ARM repeat 1433 1583 IPR016024 -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 99 156 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1590 1735 - -
Aip09g01273 1735 Coils Coil 1075 1095 - -
Aip09g01273 1735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 128 442 IPR045208 GO:0003743
Aip09g01273 1735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 691 1591 IPR045208 GO:0003743
Aip09g01273 1735 Pfam MIF4G domain 993 1215 IPR003890 GO:0003723|GO:0005515
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1085 1105 - -
Aip09g01273 1735 Gene3D - 993 1228 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1 33 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 387 414 - -
Aip09g01273 1735 Gene3D - 1429 1600 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 742 762 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1719 1735 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1638 1654 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 525 564 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1 85 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 615 637 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 747 762 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 43 85 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 693 723 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1601 1615 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1616 1637 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1682 1718 - -
Aip09g01273 1735 SMART if4_15 993 1215 IPR003890 GO:0003723|GO:0005515
Aip09g01273 1735 MobiDBLite consensus disorder prediction 109 156 - -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 615 645 - -
Aip09g01273 1735 ProSiteProfiles MI domain profile. 1437 1561 IPR003891 -
Aip09g01273 1735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 128 442 - -
Aip09g01273 1735 SUPERFAMILY ARM repeat 989 1217 IPR016024 -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 373 414 - -
Aip09g01273 1735 Pfam MA3 domain 1442 1551 IPR003891 -
Aip09g01273 1735 SMART ma3_7 1438 1552 IPR003891 -
Aip09g01273 1735 MobiDBLite consensus disorder prediction 1226 1281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01273 Aip-Chr9 21118302 21134146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01273 1 633 Eukaryotic Initiation Factors Gene Family AT3G60240 33.835 1.25e-63 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01273 K03260 - gmx:100798562 1747.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01273 09 21118302 21134146 Aip09g01273 09 21118302 21134146 ECH
Aip09g01273 09 21118302 21134146 Aip06g02994 06 124274447 124282729 PCT