Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01261 ATGTGGAATCTTTTATCATGGGTTATGGAAGCTGCTGCTATCGTCATGGCCATTGCTGTGGCACATGGAGGGGGTAAAAGTGGAGATTACCAATACTTAGTTGGCATAATTATTTTGCTAATTATAAACTCCAGCATCAGTTTCAAAGAAGAAAACAATGCTGGTAATGCAGCTGCAGCACTTATGGCAAGACCGGCCCCAAAAGCAAAGTCTGCTCTAACTGGAGAATCACTTCCTGTGACTCATCTTGTTCAAAGCACCACACATGTTGCCCATTTCCAGAAGGTTCTAACTTCTATTGGGAACTTGTGCATCTGTTCCATTGCGATTGGGATGCTTATTGAGATAAATGTGATATATGGGATCCAGAAAAGGAAATACCGAGTTGGTATTGATAATCTCCTTGTTCTGCTTATTGGTGGGATCCCTATTGCAATGCCAACTGTGCTTTCTGTTACAATGGCCATTGGTTCACATCGCTTGTCTCAGCAGGCAAGGGCTGGAATAAAGGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACAGCACTTACATACATTGATAAAGCTGGCATGATGCAAGGGGTAGCAAAGGTGCTCCAGAGCAGGTTAGACCTTTATTAA 630 0.4222 MWNLLSWVMEAAAIVMAIAVAHGGGKSGDYQYLVGIIILLIINSSISFKEENNAGNAAAALMARPAPKAKSALTGESLPVTHLVQSTTHVAHFQKVLTSIGNLCICSIAIGMLIEINVIYGIQKRKYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQARAGIKEVHFLPFNPTDKRTALTYIDKAGMMQGVAKVLQSRLDLY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01261 209 Gene3D - 1 167 - -
Aip09g01261 209 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 164 IPR023298 -
Aip09g01261 209 Pfam E1-E2 ATPase 82 163 - -
Aip09g01261 209 PANTHER CALCIUM-TRANSPORTING ATPASE 81 164 - -
Aip09g01261 209 PANTHER CALCIUM-TRANSPORTING ATPASE 1 73 - -
Aip09g01261 209 PANTHER PLASMA MEMBRANE ATPASE 81 164 - -
Aip09g01261 209 PANTHER PLASMA MEMBRANE ATPASE 1 73 - -
Aip09g01261 209 PANTHER PLASMA MEMBRANE ATPASE 164 200 - -
Aip09g01261 209 PANTHER CALCIUM-TRANSPORTING ATPASE 164 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01261 Aip-Chr9 20570600 20574006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01261 1 207 Primary Pumps ATPases AT3G60330 49.658 2.57e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01261 K01535 - rcu:8265793 208.764