Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01250 ATGGCGAAAGTGGGAAAACTAACGAAGATCAAGTCAGCGATCAAAAGGTGGCCGTCACTGAGCAAGCTGAGCCGCAACAACAGCTGCGTCTCCGCCGCCAGCTGCGACTCAAACCACGGCGCCGCGTCTTCCAAGGAACAGAACGTTGTGTACGTCGGCAGATCGCGGAGGAGGTACCTCGTGAACTCTGAGATCATAGATCACCCGGTGTTCCAGGAGCTGGTGGACAGGTCCAACAGCAACAATAATAGTAATGGTGGGTGCCATGGCGGAATAGTTGTTTCTTGTGAGGTGGTTCTGTTTGAGCACTTGCTTTGGATGCTTGAGAGTGCTGAGACTCAGTTGGGGTCCATGGATGAGCTGGTTGAGTTCTACACTTGTGCATGCTGA 390 0.5308 MAKVGKLTKIKSAIKRWPSLSKLSRNNSCVSAASCDSNHGAASSKEQNVVYVGRSRRRYLVNSEIIDHPVFQELVDRSNSNNNSNGGCHGGIVVSCEVVLFEHLLWMLESAETQLGSMDELVEFYTCAC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01250 129 Pfam Auxin responsive protein 15 108 IPR003676 GO:0009733
Aip09g01250 129 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR78 4 127 - -
Aip09g01250 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01250 Aip-Chr9 20217695 20218496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01250 3 113 Calmodulin-binding Proteins AT4G34750 26.786 1.24e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01250 - - gmx:100806352 177.563