Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01247 ATGGCTGGTGAAGGAGATAAAAAGAACGACTTCTATGCGGTTCTGGGATTGAACAAAGAGTGCACTGATTCAGAGCTAAGGAATGCATATAAGAAACTAGCACTGAAATGGCACCCTGATCGTTGTTCAGCGACGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAAGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTGGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGAATGAAATGGTAACAATGATGAGTCAAACAAACTCAAATGAAAATGGAGAAGAGAGCTTTGAGGAGCTGCAACAGCTGTTTGAAGATATGTTTCAAGATGATATTGGATCAGATAGAAGCACCACTTTTACTACTGCCGGTTGCTCCTCTTCGTCCGCGTGCATGGCTTATAGTGGAAACTCCAACTCGAATAAGCGCAATTCGGCTGAGATGAACTTTTTGAAGGCAGATAATTCCTTTGACTTTGATACCAGTTACCAGAACTTCTGCTTAGGGGTTAGTATATATAACAATACAATACTAAACATTTCAGGCTTCTCAGTTGAACTGAATTACTTGTGTTTGGAAAAATCATTTTTGGAAACAACAAATGTAGGCTTgtttggattgtga 678 0.4027 MAGEGDKKNDFYAVLGLNKECTDSELRNAYKKLALKWHPDRCSATGNSKFVEEAKKKFQAIQQAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTNSNENGEESFEELQQLFEDMFQDDIGSDRSTTFTTAGCSSSSACMAYSGNSNSNKRNSAEMNFLKADNSFDFDTSYQNFCLGVSIYNNTILNISGFSVELNYLCLEKSFLETTNVGLFGL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01247 225 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Aip09g01247 225 PRINTS DnaJ domain signature 12 30 IPR001623 -
Aip09g01247 225 PRINTS DnaJ domain signature 30 45 IPR001623 -
Aip09g01247 225 PRINTS DnaJ domain signature 53 73 IPR001623 -
Aip09g01247 225 PRINTS DnaJ domain signature 73 92 IPR001623 -
Aip09g01247 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 190 - -
Aip09g01247 225 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Aip09g01247 225 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Aip09g01247 225 CDD DnaJ 10 70 IPR001623 -
Aip09g01247 225 Gene3D DnaJ domain 6 138 IPR036869 -
Aip09g01247 225 PANTHER PUTATIVE, EXPRESSED-RELATED 1 190 - -
Aip09g01247 225 Pfam DnaJ domain 10 78 IPR001623 -
Aip09g01247 225 SMART dnaj_3 9 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01247 Aip-Chr9 20062690 20069297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01247 11 78 C2H2 Transcription Factor Family AT1G74250 44.928 2.60e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01247 - - lang:109338829 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01247 09 20062690 20069297 Aip09g01247 09 20062690 20069297 ECH