Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01246 ATGGACGACGACGATGAGATCCAGTCACATCCGTCTCCGGCGAGCGGATCCCCGGCATCGTCGCCGAGGGAGAACGGCCGGATAACGGTGACGGTGGCGGCGCCGGCACCGCAGCAGCATCCGCCTCCGGCTCCTAATAGCGTGGCATTAGCGCTTCCGATTCAGCAGCAGCCAGCGCCTCCCCCGAGGGGAAACGGCGGCGGTAGCGGGGGAGGAGGAGGAGGAGGGAGGGAAGATTGCTGGAGCGAGGGCGCTACGGCGGTGCTGATTGACGCGTGGGGAGAGAGGTACCTTGAACTGAGCAGGGGGAACCTGAAACAGAAACACTGGAAGGAGGTAGCGGAGATCGTGAGCGGAAGAGAGGACTACGGCAAGACACCAAAGACCGACATACAGTGCAAGAACCGGATCGACACCGTCAAGAAGAAGTACAAGCTCGAGAAGGCAAAGATCGCCGCCGCCGGCGTACCTAGCAAGTGGCCTTTCTATGATCGCCTTGACCAGCTGATCGGTCCCACTGCCAAGATCCCCGGCGCCGGTAACTCCCCCTCCCCGGCCACACAGAAGGTTCCGCTTGGAATTCCGGTAGGGATCCGCAGCAGCGGTAATAACAATAATCAGTTCCAAACTCTAAAGAATCAAAATCAGAACCAAAACAAGCAGGTGAAGAACCAGAAGCTCTCGTTCCGGAGGCGTCATCCTACTCATCCAGAGTCTGATTCCTCGGATAGAGACCCACCGTCTCCGGTGTCCAGTGACAGTTTCCCGCCGGAGAATTATGAGCGGAAGAGGCCGAGGATGCAGCAGCAGAGAGAGATGGATATGAACCCAAACGGGCCTAAAGGAAGGGAACCGGTACTAGTGACGAAGGCGAAGGGGAAGAGCTGGGGGTGTGCAGTGAGGGAATTGACTCAGGCAATTCTCAAGTTTGGGGAGGCTTACGAGCAAGCGGAGAGTTCGAAGCTTCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCCAAGGATCTTGAGCTGCAGCGGATGCAGTTCTTCATGAAGACACAGTTGGAGATCTCGCAACTTAAGCTTGGTAAAAAAGGTACCAACAACAATGCAGGGAATCACCATAGCAGCAACACCAACAACCACCATAACAATAATAGTGACACTCTTCAACATAGTCAGGTAGAAGTTTTCAGTCAAATTAGAGCTACCAACACACGTTTGGATGGCATAGCTTTCCTTACAAAAGATCCAAGGTTTATTGAAGAATGTCTTGAGGAAGAAGGACTTTTTTCACACAGATCCAAAATTCATAGGAATAACGGGTCACCTCAGCCATTGACTCGTCCTTTTAAGATCGACCTGCCACTGTTCGATGATGAGAATGTGGAAGACTGGGTGTTCAAAGCTAAGGAGTACTTCAAATGA 1419 0.5335 MDDDDEIQSHPSPASGSPASSPRENGRITVTVAAPAPQQHPPPAPNSVALALPIQQQPAPPPRGNGGGSGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSGREDYGKTPKTDIQCKNRIDTVKKKYKLEKAKIAAAGVPSKWPFYDRLDQLIGPTAKIPGAGNSPSPATQKVPLGIPVGIRSSGNNNNQFQTLKNQNQNQNKQVKNQKLSFRRRHPTHPESDSSDRDPPSPVSSDSFPPENYERKRPRMQQQREMDMNPNGPKGREPVLVTKAKGKSWGCAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQLEISQLKLGKKGTNNNAGNHHSSNTNNHHNNNSDTLQHSQVEVFSQIRATNTRLDGIAFLTKDPRFIEECLEEEGLFSHRSKIHRNNGSPQPLTRPFKIDLPLFDDENVEDWVFKAKEYFK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01246 472 MobiDBLite consensus disorder prediction 172 285 - -
Aip09g01246 472 Gene3D - 81 146 - -
Aip09g01246 472 Coils Coil 205 228 - -
Aip09g01246 472 MobiDBLite consensus disorder prediction 10 27 - -
Aip09g01246 472 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 358 - -
Aip09g01246 472 MobiDBLite consensus disorder prediction 1 80 - -
Aip09g01246 472 MobiDBLite consensus disorder prediction 198 224 - -
Aip09g01246 472 MobiDBLite consensus disorder prediction 361 385 - -
Aip09g01246 472 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 2 358 IPR044823 -
Aip09g01246 472 Pfam Myb/SANT-like DNA-binding domain 78 169 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01246 Aip-Chr9 20002993 20006572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01246 1 373 Trihelix Transcription Factor Family AT3G14180 46.035 2.25e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip09g01246 Myb_DNA-bind_4 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01246 - - adu:107464875 619.772