Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01234 ATGTACCTTCATCATTCATATATTAAACACATAACATTCTTCCTTTATCTCAGTAATCCAAAAACCACGAACCCAAATATGGTTATAGATTTCTTATCTCCTGGCTTAATTCCAACCATAGCAACAATATTAGCCACTTTTGTGGCCGTCGACCTCCTCCTGCGCCATATTCGTGGCCGACGATACAATCTGCCACCAGGCCCAAAACCATGGCCCATCATAGGGAACCTAAACCTCATTGGATCCCTTCCTCACCGGTCCATCGACGATCTTAGCAAAAAATATGGGCCCATCATGCATCTTTGGTTCGGCTCCCACCCTGTAGTTGTGGGTTCATCAGTAGAAATGGTCAGATCTTTCCTCAAAACCCACGACGCCGCCATAGCCGGCCGACCCAAATTCTCTGCCGGAAAATACACAACCTACAACTATTCCGACATAACATGGTCTCAGTATGGCCCGTACTGGCGGCAAGCGCGAAGAATGTGCTTAATGGAGCTCTTCAGCGCTAAACGCCTAGAGTCGTATGAGTACATAAGAAAAGAAGAGATGCAAAATCTGCTGAGTGATCTTGCCAACTCTAATAACAAAACAGTGTTGTTGAAGGACCATCTTTCAACTCTAAGCCTCAATGTTATAAGCCGCATGGTGCTTGGGAAGAAGTACTCGGAGAAATCAGAGAACGCAATTATATCACCGGACGAATTCAAGAAGATGCTGGACGAGTTGTTCTTGCTGAACGGTGTGCTTAACATAGGGGACTTCATCCCTTGGATTCATTTCTTGGATTTGCAGGGATACATCAAGAGGATGAAAGCTTTGGCTAAGAAGTTTGATAGGTTTATGGAGCATGTGTTGGATGAACACATTGAGAGGAGGAGAGCAGTGAAGGATTATGTTGCCAAGGACATGGTTGATGTTCTTTTGGAGCTTGCAGAGGATCCTAATCTTGAGGTCAAACTTGAGAGGCATGGCGTTAAAGCATTTAGTCAGGATTTAATAGCTGGTGGAACAGAGAGCTCTGCAGTTACTGTAGAATGGGCAATTTCGGAGATGTTGAAAAAGCCAGAGATTTTCAAAAAGGCAACAGAAGAACTAGACAGAGTGATAGGAAGAGAGCGATGGATTGAAGAGAAAGACATTGTTAATTTACCTTACATTAACGCCATCGCTAAGGAGACAATGAGGTTACACCCGGTGGCCCCAATGCTGGTGCCACGGAAAGCCCGCGAAGATATTAAGATCGACGGCTATGATATCCCGAAAGGGACACAAGTGCTAATCCATGTTTGGACCGTTGGCAGAGACCCCGAGATATGGGACAACCCAACTGAGTTTCAACCCGAACGATTTCTTGGTAAGGATATTGATGTGAGAGGCCATGATTATGAGTTGTTGCCATTTGGTGCTGGTAGAAGAATGTGCCCGGGTTACCCTCTTGGACTCAAGGTGATTCAATCAAGTTTGGCTAATTTGTTACATGGCTTTAATTGGAGACTACCTGATAATATGAAAAAAGAAGACTTGAATATGGAGGAAATTTTTGGGCTTTCAACTCCAAAGAAATATCCTCTTGAGGTGGTCATAGAGGCTAGACTTCCTAACCGTCTTTATTCCATCTGA 1623 0.4424 MYLHHSYIKHITFFLYLSNPKTTNPNMVIDFLSPGLIPTIATILATFVAVDLLLRHIRGRRYNLPPGPKPWPIIGNLNLIGSLPHRSIDDLSKKYGPIMHLWFGSHPVVVGSSVEMVRSFLKTHDAAIAGRPKFSAGKYTTYNYSDITWSQYGPYWRQARRMCLMELFSAKRLESYEYIRKEEMQNLLSDLANSNNKTVLLKDHLSTLSLNVISRMVLGKKYSEKSENAIISPDEFKKMLDELFLLNGVLNIGDFIPWIHFLDLQGYIKRMKALAKKFDRFMEHVLDEHIERRRAVKDYVAKDMVDVLLELAEDPNLEVKLERHGVKAFSQDLIAGGTESSAVTVEWAISEMLKKPEIFKKATEELDRVIGRERWIEEKDIVNLPYINAIAKETMRLHPVAPMLVPRKAREDIKIDGYDIPKGTQVLIHVWTVGRDPEIWDNPTEFQPERFLGKDIDVRGHDYELLPFGAGRRMCPGYPLGLKVIQSSLANLLHGFNWRLPDNMKKEDLNMEEIFGLSTPKKYPLEVVIEARLPNRLYSI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01234 540 PANTHER CYTOCHROME P450 71A1-LIKE 41 531 - -
Aip09g01234 540 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 116 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PANTHER STEROID 21-HYDROXYLASE-RELATED 41 531 - -
Aip09g01234 540 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Aip09g01234 540 SUPERFAMILY Cytochrome P450 65 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 Pfam Cytochrome P450 65 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip09g01234 540 Gene3D Cytochrome P450 57 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01234 Aip-Chr9 19593791 19597100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01234 40 540 Cytochrome P450 AT5G07990 41.487 8.52e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01234 K20623 - gmx:100790480 887.1