Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01228 ATGTACAACAATGAAGATACCGACCTTTCATCCTTAGCCTTAACAGGAGCACAAACTGAGATAACAAATAGTAGTGTAAGCTCATTCAATTCCAGTGTAAACTTAGATTTCATCATAGAAAACAAACTAATACACCTATCAAGGAGGCCCATTTTCGAAAACCCAGAAATCAAGGAGTTCCACGATACAAAATCCTTGTTGGGTATTTCACCGAATAGCTTCTCTGCATCATGGATAGAACCCATATTGAGGGAATTAAGGAGTAACAATAACAACATGAATGCAAAGGTTGACTTCACTAACAAACTACTAGTATTGAAGAATAGAATAGTAGCTCATGTCACAGTAACCACCACCACCACCATTATTAGAACCTACGCCGCCACCATCGCCACTGCCTCCGTCTCCGTTCACCTGACATGTACCCATCTTGCAAAAGGGTCGCCAGAAACGCTCCAAATCAGGGATTTTGAATGCCGCAAGATCTCGCAGCGCCACCGCCGATGCACCACCTCGGACACGAGCATTTCACGCCgaaaaagaaagAAACGAAAGGAAGGAAGAGAATTTTGTTTGACTCTTGAAAGGAAGAAAAAATTGAGGAAGGAGAAGGATTTGAACTTCTTTTTTCTAATCTGCTTCTGCGGGTGGTTGGCAACGATGTCTGCGACAATGATCAGTGATCCGATGGTGATAGCAGCACCGGCAGAAACTCAATCAGCAGCGAGCATAGTATCCGAAGTGGAATTCGCCATATGCGATTGCTGCGGACTAACAGAAGAGTGCACAATCGGGTACATAGAACGAATCAGGGAGCGTTACCACGGAAAATGGGTTTGCGGTTTGTGTGGCGAAGCCGTGAAGGACGAGATTGTGAGGTCTGAGAGGCTCCTAAGTACTGAAGAAGCCATGACTAAACACATGAATTTCTGCAAGAAGTTCATCACTTCAGGGCCTCCAACTAACCCAACCGTGCATTTGATTTCTGCTATGAGACAGATTCTTAGGAAGAGTCTTGAGAATTCTCCAACAAGAGTAAGATCCATGCCAACTAGTCCTACTACTAATAACAACAAAAGTGGCAGAGAACTTTCTAGGTCTGAGAGTTGCTTCTCTACTCTGGCAGCTGGATCATGA 1137 0.4389 MYNNEDTDLSSLALTGAQTEITNSSVSSFNSSVNLDFIIENKLIHLSRRPIFENPEIKEFHDTKSLLGISPNSFSASWIEPILRELRSNNNNMNAKVDFTNKLLVLKNRIVAHVTVTTTTTIIRTYAATIATASVSVHLTCTHLAKGSPETLQIRDFECRKISQRHRRCTTSDTSISRRKRKKRKEGREFCLTLERKKKLRKEKDLNFFFLICFCGWLATMSATMISDPMVIAAPAETQSAASIVSEVEFAICDCCGLTEECTIGYIERIRERYHGKWVCGLCGEAVKDEIVRSERLLSTEEAMTKHMNFCKKFITSGPPTNPTVHLISAMRQILRKSLENSPTRVRSMPTSPTTNNNKSGRELSRSESCFSTLAAGS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01228 378 PANTHER OS01G0745000 PROTEIN 224 374 IPR012876 -
Aip09g01228 378 Coils Coil 83 103 - -
Aip09g01228 378 PANTHER - 224 374 - -
Aip09g01228 378 MobiDBLite consensus disorder prediction 339 368 - -
Aip09g01228 378 Pfam Protein of unknown function (DUF1677) 248 337 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01228 Aip-Chr9 19229913 19236387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01228 - - gmx:100803697 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03513 06 132356728 132357548 Aip09g01228 09 19229913 19236387 ECH
Aip09g01228 09 19229913 19236387 Aip09g01228 09 19229913 19236387 ECH
Aip09g01228 09 19229913 19236387 Aip06g03513 06 132356728 132357548 ECH
Aip09g01228 09 19229913 19236387 Aip10g02531 10 112209752 112210836 ECH