Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01207 ATGCAGAAGCAGAAAGCAATGCAGAGGAGGCGGCGAGGCGGCGAGGCGGCAAGGCGTTGCCACCCAACCTTTGCCATTGCGCCCTTACCGGCGTCCCAACCCGTCACCACCCCCTGTCTGAACCCTAACCCAGCCAACCACCCCCGCGACCCTCTACCCTCTTCTCCCCATCGCGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTATTATTCTATATGCTGCTGTGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGCAATTCTCAACCAAGAATTTCATTGGCAGGGATGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCAGTCGTGGCGGTTAAGAGGATCTTGGAATCTGATTTTCAAAGGGATATGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGAAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAGAGTTTTTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGA 645 0.4744 MQKQKAMQRRRRGGEAARRCHPTFAIAPLPASQPVTTPCLNPNPANHPRDPLPSSPHRVQHKLVSIDGNASHSENCFKFIILYAAVFVNQYGPESNGAMSCIFGRLGGRSLMMMQFSTKNFIGRDGFGLVFKGVLSDGSVVAVKRILESDFQRDMEFCNEVEIISNLKHRNLVPLRGCCVVDDDDDEKFNDRGSQSFWFMITCRMETLKTICFW 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01207 214 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 57 105 - -
Aip09g01207 214 Gene3D Phosphorylase Kinase; domain 1 110 189 - -
Aip09g01207 214 SUPERFAMILY Protein kinase-like (PK-like) 115 183 IPR011009 -
Aip09g01207 214 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 115 185 - -
Aip09g01207 214 Pfam Protein tyrosine and serine/threonine kinase 119 181 IPR001245 GO:0004672|GO:0006468
Aip09g01207 214 MobiDBLite consensus disorder prediction 35 57 - -
Aip09g01207 214 ProSiteProfiles Protein kinase domain profile. 116 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01207 214 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 57 105 - -
Aip09g01207 214 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 115 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01207 Aip-Chr9 18631112 18636015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01207 116 188 Receptor kinase-like Gene Family AT1G11050 73.973 5.99e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip09g01207 PK_Tyr_Ser-Thr 1.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01207 - - aip:107640759 197.593