Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01206 ATGTCAAATTTCCCTGATGCGGTGGCCGATGGCCGGAGGTCCGGCAAGGCACCGGAGAAGTCCAATTTTTCTCAGACTTGCAGCCTCTTGAGCCAGTTCTTGAAGGAGAAGCGTACTTCTGGAGCTTCCACTCTCGGAGTTGGTTCTAAAATGGAGCCTAGAGTAGGTACCAAGGATTTTCTAGCCAGTATTCATAATTCAGATGGAGCTTTGAGACTAAATTCTGCGGCTATGGATTCCCTTCCCCAGCTTGTGGAAAATCCCTGCATCAAGAAGTCTAATATTAGGTCATTGGAACCTGAAACTCCACAATTGACCATATTCTATTCCGGAAAAATGTTGGTATTTGATGCCTTTCCACCAGACAAGGCCACAGAGGTAATGGAGTTAGCCACCAAGTTAGCCTCGAACAGTTCCATTGTCGAACAAAGCCAGCCCAGTGCTTCGGTTGCGACTGAAAATTTGAGTAAAGACAAAGTGCCGCAGACAAATAATGCCTCTGAAACTCCTAGGCCAGGAAAGCAAGCTGTTGGTTCCGGTATGAATAAAGAAACTGAACAGCCAACATTTAGGCTTTTTTTGGTTGGCGTttttatttttcaaaattttctctttttccttcacgagatgctaaaagtgaaaactgaaaatgagaacgcaaaccaaaaacaccTTTATTTTTCTCAATCATGTTCTCTATGTTGA 705 0.3972 MSNFPDAVADGRRSGKAPEKSNFSQTCSLLSQFLKEKRTSGASTLGVGSKMEPRVGTKDFLASIHNSDGALRLNSAAMDSLPQLVENPCIKKSNIRSLEPETPQLTIFYSGKMLVFDAFPPDKATEVMELATKLASNSSIVEQSQPSASVATENLSKDKVPQTNNASETPRPGKQAVGSGMNKETEQPTFRLFLVGVFIFQNFLFFLHEMLKVKTENENANQKHLYFSQSCSLC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01206 234 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 8 181 - -
Aip09g01206 234 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Aip09g01206 234 SMART tify_2 98 133 IPR010399 -
Aip09g01206 234 MobiDBLite consensus disorder prediction 142 172 - -
Aip09g01206 234 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 8 181 IPR040390 -
Aip09g01206 234 MobiDBLite consensus disorder prediction 1 23 - -
Aip09g01206 234 MobiDBLite consensus disorder prediction 142 182 - -
Aip09g01206 234 Pfam tify domain 99 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01206 Aip-Chr9 18620682 18623401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01206 14 131 Tify Gene Family AT1G72450 35.075 6.55e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip09g01206 tify 1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01206 K13464 - gmx:100778559 257.684