Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01200 ATGGATTGTGTGAAGATGTTGAAGAACAAAGGATACAGCAAAGTAGAAGAAGAGAATCAGAGTCACTACGTCGAAGATCAGCGCAAACATTATTCCAAATCCCTAATCGCTACTCTCTCCACCGTCGCACTCTTCTTTCTCACTCTCCTCTTCGTTCTCGCCTTAGTCCGCCATGAGCCCGCCGAGTCAGCCACCGAGTCCATTCGAGTCGCCTGCAACGTAACTCGTTATCCCAACTCCTGCTTCACCAGCTTAACCTCCTTCCTCAGCAACACCACTACCACGAAAGCCATGGATCCACAAGCTATCTTGTCCCTTTCACTCCGAGTCTCCATCCACGAGCTCTCTAATCTCGCCTCCGCCTCCTCCCTCTCCGTTGACTGCAGGGAGCTCGTGGATGACGCCGTCTCCCGCCTCAACGACTCCCTCTCCAGGGTGGAAGCGGCACCAAAGGGGCTTACGGAGGTGGAGATGGCGGACGCGCGCACGTGGGTGAGCGCCGCCTTGACGGACCAGCAGACGTGCCTGGATGGACTGGAGGAGATTGGGTCCTCCAACGCTTCGGAGGTGAAGACCAAGATTGAGAGGTGCGGTGAGTACACCAGCAATACCTTGGCCATTCTTGCCAATTTTAAAATCTTAGCTTGA 648 0.5448 MDCVKMLKNKGYSKVEEENQSHYVEDQRKHYSKSLIATLSTVALFFLTLLFVLALVRHEPAESATESIRVACNVTRYPNSCFTSLTSFLSNTTTTKAMDPQAILSLSLRVSIHELSNLASASSLSVDCRELVDDAVSRLNDSLSRVEAAPKGLTEVEMADARTWVSAALTDQQTCLDGLEEIGSSNASEVKTKIERCGEYTSNTLAILANFKILA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01200 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 210 IPR035513 -
Aip09g01200 215 PANTHER PECTINESTERASE 1-LIKE 4 209 - -
Aip09g01200 215 CDD PMEI-like_3 71 211 - -
Aip09g01200 215 SMART PMEI_2 63 207 IPR006501 GO:0004857
Aip09g01200 215 TIGRFAM PME_inhib: pectinesterase inhibitor domain 44 209 IPR006501 GO:0004857
Aip09g01200 215 Pfam Plant invertase/pectin methylesterase inhibitor 67 207 IPR006501 GO:0004857
Aip09g01200 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 211 IPR035513 -
Aip09g01200 215 PANTHER PECTINESTERASE 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01200 Aip-Chr9 18468603 18469842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01200 60 215 Carbohydrate Esterase AT1G53840 34.444 4.95e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01200 - - aip:107619071 381.333