Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01194 ATGGTGGTTGTTAGCAAGGACGAAAACGAAAACTTCACCACCATCAACGCAGCCATACCTGCGGCGCCAAATAACACGGCTTCCAATGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCCATTGCGAAAAATAAGAAGCAGTTGATGCTAGTTGGAGATGGAATCAACCAGACAATTATCACAGGCGATCGCAATGTTGTCGATGGCTCTACAATTATCCTCTTCCTTCCTACCCTCTCTCTTTGTCTCTTTCTGCGGAGAGAAAAAGATGAAGAATATTGA 303 0.4323 MVVVSKDENENFTTINAAIPAAPNNTASNDGYFLVFIKKGVYEEYVSIAKNKKQLMLVGDGINQTIITGDRNVVDGSTIILFLPTLSLCLFLRREKDEEY 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01194 100 Pfam Pectinesterase 2 78 IPR000070 GO:0030599|GO:0042545
Aip09g01194 100 SUPERFAMILY Pectin lyase-like 2 78 IPR011050 -
Aip09g01194 100 Gene3D - 1 89 IPR012334 -
Aip09g01194 100 PANTHER PECTINESTERASE 1 79 - -
Aip09g01194 100 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01194 Aip-Chr9 18293454 18293756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01194 1 78 Carbohydrate Esterase AT1G02810 58.974 3.54e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01194 K01051 - gmx:100792847 107.457