Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01152 ATGTTAACTTGCATAGCATGTTCCAAACAACTCAACAATGGATCTCTTCACCAACCAGAAGATGAAGAAGCTGTTCATACACCAAGCACGAAGCAAGCCATCAAGGCTCTCACTGCCCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATATAAGAATTGCAAGCCTTGTTCCGGATCTTCAAATGGTAATAGGAAAGGGAATTATGCTGACTCGGATATGGGTTCGGATTCAGCGAGGTTTCACTGGGCCTACCGAAGAACGGGTAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAATGGAAGCCAGGTTGAAAGGGCTTTCGAGTGGGGAAGGGACGCCGGCATCGGTTAGTGGACGGACCGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAAGAATGGGTTGCACAAGTGGAGCCCGGTGTGCTCATTACTTTTGTTTCATTGCCTCAGGGTGGGAACGATCTGAAGCGGATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAGAGGTGGTGGACCGAAAACTACGACAAGGTCATGGAGTTATACAATGTTCAAAGGTTCAATCAACAAGCTGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGCAAAGTTCAAGGATTGAATCTGTGAGGGACAGCCCAGTCACTCCTCCTCTCAGCAAGGAGCCCCTGCCTAGTCATTTTCACCACCCAATTGGAATGGGGTACTCTTCTTCGGATTCTCTGGATCACCACCATACGCAACCTCGCCCTTGCTATGAAACTAGCTGTCTAGCCTCAACACCTAAACTCTCCGACATTACTGCAATAAAAACTGAAAGATCATCCCTGGATGCTTCAGCAAGGACGAGTTCATTGGGAGAGGGAGACCACTCGGGTGAGCTCTCAAACAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAAGATGAACCGGGAGTATACATCACTATCAGAGCACTGCCAGGCGGAGCCAGAGAACTTCGGCGAGTACGGTTCAGCCGAGAGAGGTTCGGAGAAATGCATGCTAGATTATGGTGGGAGGAGAACCGCGCCAGGATACAAGAACAATACTTGTGA 1110 0.4928 MLTCIACSKQLNNGSLHQPEDEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRKGNYADSDMGSDSARFHWAYRRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWTENYDKVMELYNVQRFNQQAVPLPTPPRSEDEQSSRIESVRDSPVTPPLSKEPLPSHFHHPIGMGYSSSDSLDHHHTQPRPCYETSCLASTPKLSDITAIKTERSSLDASARTSSLGEGDHSGELSNSNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01152 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Aip09g01152 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
Aip09g01152 369 MobiDBLite consensus disorder prediction 199 265 - -
Aip09g01152 369 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Aip09g01152 369 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 369 - -
Aip09g01152 369 MobiDBLite consensus disorder prediction 283 312 - -
Aip09g01152 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Aip09g01152 369 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Aip09g01152 369 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01152 Aip-Chr9 17144719 17148518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01152 1 369 Major Intrinsic Protein MIP AT1G31880 46.891 2.50e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01152 - - gmx:100805480 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01152 09 17144719 17148518 Aip09g01152 09 17144719 17148518 ECH