Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01144 ATGAACAACATGAATCATGAGTCGATATCAACATCAACCAATCGTGAATCGGCGATGCTAGACCCGGAGGACGGGCTTTTGAATGAGACAGACATAGAGCCTCAATCTGCTCAGGTACCAAGTCATGTCAACATTGAAGATGTGCTAAAGATGGAGTTCTGTACCCCTGGGGAAGCAAGAGAATTCTACACGAGTTATAGTAGGCTAAAAGGTTTTGCAATAAGGAAGAGTAAGAGGGTAAAAAATGCCAGAGGAGAGATTGTTCGATACAATTTTGTTTGCAACAGACAAGGGTTTAGGCACAAGAAGTGGTTAGATAAGCTGGATAGGAAAAGAGAGCACAAGCCTATAATGCGATGCGGGTGTGTAGCAGAGATGAGGATAAAGAAGAATCATACTAATAGAAAATGGTTTGTTTCACAGTTTATGGAAGATCATAACTACACCCTACTCTCTAAAAGGTTTATTGGATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAATGAATAGCATGAGGCAAGTTGGGATAAGCATTCCAAAGATATACCAGTCATTTGCGATGCAAGTTGGGGGCTTTAACTTAGTAAGATTTACTAAGCAAGATATGCACAACGAGGTTCGAAAGCAACGTGCATTGCAGAACGGAGATGTAAATGCCGCACTGCATTTTTTCGATTATGCTGCCAGAAACGATGAGAAACTGTTTTGGAGGTATGAGGTAGCGGCTGGTTCTCGTATGTGTGACATTATATGGAGTGATGGTCGAAGCCAGGAAGATTATGAGGCGTTCGGTGATGTCCTCGCCTTTGATGCGACGTTTGGGAGGAACAAGTATAACCTTTCTATCATTGTTTTGTCCGAGGTTAATCACCATAATCAGACATGCGTGTTTGCAGCAGTAATGGTTTTATGTGAGTCACAGGATTCGTACAAATGGGTGCTGAGACGGTTTATGGAATGCATGCGGGGAAAGGCCCCGAAGGCAGTGATAACTGATGGGGATCCTTCTATGAGGCTAGCTATTATGCATGTTTTTCCAGATGCTCATCACAAACTTTGCGTGTGGCGCCTACTAAGGAATGCCACTGCTCATTGGGAGGCGATGGTTGACGAGTGTGGTGTTCGAGAGGTTGAATGGGTGATGGACCTCTATAGAAAGAAGTTGTCATGGACCACCGCATACATATGGGgcagaggtACCCCGGTGCTTCAAACACAGTTCCCAGAGATTGAGAGGTCAACGACAACCCTGTATACCTGTGAACTTTTTTATAGATTTCGAGAGTCCCTAAAGTGGGCCGTTAGATTTTACATTGTCGACCACCAGGATTGTAAAAATGGATGTTGCTATGTGATACAGAAGTATCGCCGACCGGAGTCAACCTGA 1401 0.4347 MNNMNHESISTSTNRESAMLDPEDGLLNETDIEPQSAQVPSHVNIEDVLKMEFCTPGEAREFYTSYSRLKGFAIRKSKRVKNARGEIVRYNFVCNRQGFRHKKWLDKLDRKREHKPIMRCGCVAEMRIKKNHTNRKWFVSQFMEDHNYTLLSKRFIGYLPSHRNMSDVEIAQMNSMRQVGISIPKIYQSFAMQVGGFNLVRFTKQDMHNEVRKQRALQNGDVNAALHFFDYAARNDEKLFWRYEVAAGSRMCDIIWSDGRSQEDYEAFGDVLAFDATFGRNKYNLSIIVLSEVNHHNQTCVFAAVMVLCESQDSYKWVLRRFMECMRGKAPKAVITDGDPSMRLAIMHVFPDAHHKLCVWRLLRNATAHWEAMVDECGVREVEWVMDLYRKKLSWTTAYIWGRGTPVLQTQFPEIERSTTTLYTCELFYRFRESLKWAVRFYIVDHQDCKNGCCYVIQKYRRPEST 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01144 466 Pfam MULE transposase domain 271 365 IPR018289 -
Aip09g01144 466 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Aip09g01144 466 PANTHER OS02G0262500 PROTEIN 46 372 - -
Aip09g01144 466 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 372 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01144 Aip-Chr9 16924997 16928093 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01144 MULE 2.6e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01144 - - adu:107458091 728.013