Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01141 ATGTACAACGAACTGAATGAAGGAAAAGAAAAAGGACGAAGAGATTTAATTAAATCATCAGATCAGTTGAGAATGGCTTCCTCCAGCAGAAAGCCGCATGATCATTGCAAAGGGAGTGCTGACACAGCCCAAGTTGGGAGTGAAAGGCAGGAGCTTGTTCATGATGAAGAGGAAACATGCTTGGACACGGTGATTGAAGCCAATGACTTCGACAGGGACAATGTTGACAAGTGTGTAGGGTTGGCCGACAGCTTTGTAGAGTCTGAAGTACTTCGAGCTGAGGATGTGCTACATATGGAGTTCAACAATCCGGAGGAAGCTAGTCGCTTCTATAATGAGTATGGACAAGCTAGGGGTTTCTCTATAAGGCAGGGAAAGAAGATAAAAAACAGTAAAGGGGAATTTGTTCGATACACCTATCTCTGCAACAGAGAAGGATTTAGAGACAAGAAGTGGTTGGAGAAAACTGATCGCAAGAGGGAGCACAAGGTTGTAACCCGTTGCGGCTGTCTTGCCGAAATGAGGATTAAGAGGAAAGCTGAGAGTGGGAAATGGTATGTGTCGCGCTTTGTGGACGAACATAACCATGAGGCTGTTCCAGCAAGGTACCTGTTGGGACCGGAAAGAGTTGATGTCAATCAAACTGGTGACATGACAGCATTGTACAGAACCAGATTGTTGAGAATGGCTTCCTCTAGCAGAAAGCTGCATGATCATTGCAAAAGGAGTGCTGACACAATCCAAGTTGGGAGTGAAAGGCAGGACCTTGTTGATGATGAAGAGGAAACATCCTTGGACACAGTGAATGAAGCCGATGGCTTCGATGGGGACAATGTTGACAAGTGTGTAAGGTTGGACAATGGCTTTATAGAGTCTGAAGTCCTTCGAGCTGAGGATGTACTACATATGGAGTTCAATAATCCTGAGGAAGCTAGTCGCTTCTATAATGAGTACGGGCGAGCTAAGGGTTTTGCTATAAGGCAGGGAAAGAAGATAAAAAACAGTAAAGGGGAATTTGTTCGGTACACTTATCTCTGCAACAGAGAAGGATTTAGAGACAAGAAGTGGTTGGACAAAAGTGATCGAAAGAGGGACCACAAGGCTGTAACCCGTTGCGGCTGTCTTGCTGAAATGAGGATTAAGAGAAAAGCTGGGAGTGGGAAATGGTATGTGTCGCGGTTTGTTGACGAACATAACCATGAGGCTGTTCCACCAAGGTACCTGTTGGGACCGGGAAGAGTTGTCAATCAAACTGGCGACATGACAGCGTTGTACAGAACCAGAGTGGATGCATTTGTGCATCTGTGTAAGCGTTTAGCAAAGGCAGCTTGCTTGACGGATGAGGACTACAAGTTGTATACCGATAGGATTTTGAGAGATACAATTTTATTAGAAATCAAGAACGGGTTGGGTGTTGAGGTCGTGAGAGGAAGTAATGTCAATGCTGAGGTAGCAAAGGATCCAATCCACGTGGGGACAAAGGGAACAGGCTGTGCCAACGAAGCATCTGGTTCAAAGGGAACAAAGAAACGCAAGTGCAGCACCTGGGGCCGTCGCGGGCATCGCAGGACTAGGTTCCCGAATGGGTCACCATCAGCTGCATTGCCTGGTGAAGATGCTGTACAAGACCGCACGGGCCACAGGCTTCAAAATGGAGTGATGGGTCAGCAAGAATTTGTGAAGCGGAAAAGGACAGTTGACCTTCTTCCTCCGGTGTCGTTTGCCAAGTTTCTTTGA 1737 0.4652 MYNELNEGKEKGRRDLIKSSDQLRMASSSRKPHDHCKGSADTAQVGSERQELVHDEEETCLDTVIEANDFDRDNVDKCVGLADSFVESEVLRAEDVLHMEFNNPEEASRFYNEYGQARGFSIRQGKKIKNSKGEFVRYTYLCNREGFRDKKWLEKTDRKREHKVVTRCGCLAEMRIKRKAESGKWYVSRFVDEHNHEAVPARYLLGPERVDVNQTGDMTALYRTRLLRMASSSRKLHDHCKRSADTIQVGSERQDLVDDEEETSLDTVNEADGFDGDNVDKCVRLDNGFIESEVLRAEDVLHMEFNNPEEASRFYNEYGRAKGFAIRQGKKIKNSKGEFVRYTYLCNREGFRDKKWLDKSDRKRDHKAVTRCGCLAEMRIKRKAGSGKWYVSRFVDEHNHEAVPPRYLLGPGRVVNQTGDMTALYRTRVDAFVHLCKRLAKAACLTDEDYKLYTDRILRDTILLEIKNGLGVEVVRGSNVNAEVAKDPIHVGTKGTGCANEASGSKGTKKRKCSTWGRRGHRRTRFPNGSPSAALPGEDAVQDRTGHRLQNGVMGQQEFVKRKRTVDLLPPVSFAKFL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01141 578 Pfam FAR1 DNA-binding domain 109 199 IPR004330 -
Aip09g01141 578 Pfam FAR1 DNA-binding domain 313 403 IPR004330 -
Aip09g01141 578 MobiDBLite consensus disorder prediction 1 51 - -
Aip09g01141 578 MobiDBLite consensus disorder prediction 511 525 - -
Aip09g01141 578 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g01141 578 MobiDBLite consensus disorder prediction 497 536 - -
Aip09g01141 578 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 200 - -
Aip09g01141 578 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 237 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01141 Aip-Chr9 16858690 16863826 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01141 FAR1 1.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01141 - - adu:107464780 1063.91