Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01127 ATGGGCAGACGTCCTTGCTGCTCGAAAGAGATGAACAAAGGTGCTTGGTCAAGAGATGAAGATCAAACCCTCTCCAAATATGTTGCCATTCATGGTGAAGGAAAATGGCAAAAGGTTGCCCAAAATGCCGCGAAGAGATTACCGGGACGAACAGACAATGAAATCAAGAACTACTGGAATACCAATCTCTCAAAGAAGCTTCAACAACAACAACAACAATGGCAGCCACCTCCTCCTTCTTCATCTTCTTCCCATAAACACAAAAACAATCTTACTCACAAACATGTACTAGTAGCACCCCAAACTCCAATTCCTAGAAGACTCAAAGCTTTTCACTACAACAACAACGATAATAATAATAATAACACTTCAATTAGTCCCTGCAGTGATGATAATAATGAAGAAGCTTCTCTCACTGATTTTCTCATTGACATTGATGATAATGATGATGATCAAATGCTGTTAGTTACTGATAATGACGACGATCACCGCCATAACTCGAAGCTGCTCGAAGAACAGAGCAATCCAAGCTCATCATCACTATTATCATCGTCAGATCAATGTAACAACTTGTTTATGTCTGAGAAATTTGACCCTTTGGAGACACTTTTGGATGTGGAGCTAAAAAGGGTGGCTTCATTTCTTGGACTCAAAAATTGA 660 0.397 MGRRPCCSKEMNKGAWSRDEDQTLSKYVAIHGEGKWQKVAQNAAKRLPGRTDNEIKNYWNTNLSKKLQQQQQQWQPPPPSSSSSHKHKNNLTHKHVLVAPQTPIPRRLKAFHYNNNDNNNNNTSISPCSDDNNEEASLTDFLIDIDDNDDDQMLLVTDNDDDHRHNSKLLEEQSNPSSSSLLSSSDQCNNLFMSEKFDPLETLLDVELKRVASFLGLKN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01127 219 SMART sant 12 65 IPR001005 -
Aip09g01127 219 MobiDBLite consensus disorder prediction 112 133 - -
Aip09g01127 219 PANTHER MYB TRANSCRIPTION FACTOR 44 215 - -
Aip09g01127 219 Pfam Myb-like DNA-binding domain 13 63 IPR001005 -
Aip09g01127 219 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 43 - -
Aip09g01127 219 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 44 215 - -
Aip09g01127 219 MobiDBLite consensus disorder prediction 65 88 - -
Aip09g01127 219 CDD SANT 15 63 IPR001005 -
Aip09g01127 219 ProSiteProfiles Myb-like domain profile. 8 63 IPR001005 -
Aip09g01127 219 MobiDBLite consensus disorder prediction 65 86 - -
Aip09g01127 219 MobiDBLite consensus disorder prediction 111 133 - -
Aip09g01127 219 Gene3D - 10 69 - -
Aip09g01127 219 PANTHER MYB TRANSCRIPTION FACTOR 1 43 - -
Aip09g01127 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 67 IPR017930 -
Aip09g01127 219 SUPERFAMILY Homeodomain-like 8 68 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01127 Aip-Chr9 16540788 16542257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01127 1 67 MYB Transcription Factor Family AT2G16720 37.069 1.33e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip09g01127 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01127 K09422 - gmx:100101858 181.8