Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01118 ATGTCAGGGCAGCGACAAACGCTAGCCGGATTAACACTTGACGACGTCTTAGCAAAGCAGAAAGCATTTTACCACTCACAATCCAACACCAAAACCCTCCTTGATATCCTCAAAGACGACGTCTCCTTCAACAAGAACCGCAAGTCTTGGAAAGCATTCAAGGACACCCTTCTGCTAAAGCGTTACGGCTCTGCTTGGACTCGAATTCCCACTTCCGACATTCCCATCTCATTCTGCCGCCGCACCTCTCTCAAACACTTTCAATCCATGGCTGACAACACCGACAACCTTGATGAAGTCCCAGCCTTACCTCCCCCTTCACTCGCAGCCAAGCCCACCTTCTCCCGCCGGAGTTCCACCCGCTACAGCTCCCCGTCCGAGGTCACATTCACCGCTGGCGATCCCACGGAGCCGGCCCCTGCCGGCAGCGCGCTACTCCGGCCTCAGCTTTCGCGACGGAACTCCTCCGGCATGGTGTCGGAGCCATTCCGGAAGGGCCGCGTGGTGACGTTCCGGGACAACATGGACGACGAGGAGCAGGACGAGGAGGACGGGTCACGTGCGGATGGCAGCAGGACACTATCAGCAAGAGAGGCGGTTGCGGCACAGGAGGCGGCGGAGGCGGCTGCTGCAGGGGAGGTTGTTGGAGAGGGAGAGGAAGACGAGGGGGCACAGCCGGTGATGATGTCACTGATGGACTTGTTGGAGGAGACTGACAGAGAGATGGGGCTTGAAGGATCGAGGTACATTCTGAGTGATGAAGAGGATTTTGATGAGGACGAGGAAGATGAGGATGGTGATGGTGATGATTTGGAATACACGTGCTCAGTGTGCATGGTGAGGCATAAGGCTAATGCTATCAGCCGCTGTGGCCACTCATACTGCAGGATGTGCTCTAGGGAACTCATGGCTGGCAAAGGCAACTGCCCTCTCTGCAACAATTTCGTTGTTGAGATTCTTGACATCTTTTGA 972 0.5586 MSGQRQTLAGLTLDDVLAKQKAFYHSQSNTKTLLDILKDDVSFNKNRKSWKAFKDTLLLKRYGSAWTRIPTSDIPISFCRRTSLKHFQSMADNTDNLDEVPALPPPSLAAKPTFSRRSSTRYSSPSEVTFTAGDPTEPAPAGSALLRPQLSRRNSSGMVSEPFRKGRVVTFRDNMDDEEQDEEDGSRADGSRTLSAREAVAAQEAAEAAAAGEVVGEGEEDEGAQPVMMSLMDLLEETDREMGLEGSRYILSDEEDFDEDEEDEDGDGDDLEYTCSVCMVRHKANAISRCGHSYCRMCSRELMAGKGNCPLCNNFVVEILDIF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01118 323 MobiDBLite consensus disorder prediction 96 225 - -
Aip09g01118 323 CDD RING-HC 275 312 - -
Aip09g01118 323 SUPERFAMILY RING/U-box 274 319 - -
Aip09g01118 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
Aip09g01118 323 MobiDBLite consensus disorder prediction 112 131 - -
Aip09g01118 323 ProSiteProfiles Zinc finger RING-type profile. 275 313 IPR001841 -
Aip09g01118 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 323 IPR013083 -
Aip09g01118 323 SMART ring_2 275 312 IPR001841 -
Aip09g01118 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
Aip09g01118 323 Pfam Zinc finger, C3HC4 type (RING finger) 273 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01118 Aip-Chr9 16229940 16233680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01118 1 323 C3H Transcription Factor Family AT3G07120 32.880 1.01e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01118 - - lang:109359938 274.633