Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01102 ATGAACATGGAACCAAACCCAACACAAGATGCTCTTGACTGGCAGCTAGAAGGTTCTGCCTCTTTCTTCCCACCATTCTTGGATTATCCATATCCCATTCAAGATTATCAGTTCTGGGATCAAAACCAAGACATAATCTGCTACCATAACCAAATTGATGCCGGCACCGGATCCCCGAATGCCGCAAACGGCACTGCCGCCGTGGTGGCCACCACTGCCACCAGTACAACCTGCACAACACCCTCGGATCCTGAACCTTACAGTTACAACAACCTACCAGTTTCAGACTTGCCGACGAAGAAACGAAACTCCAGCGACAATGATTGCTCGGTCCAAAAGCCTTCACAGAGCCACAGAGCCAAGAAATTCAAGGCTCGTTCAACTAATGAAGTTGACAATGGCGATTCAGTTGCCGAAGGGACTAGTGTTAGAAAATCTGGTGGGAACAAAAAAGGTGGAGGCAAGAACAATGGCAATAACTGCAACAATGGAAACAAGGAAGGTAGGTGGGCGGAACAGTTGCTCATCCCTTGTGCTTTAGCTATAAATGCTAAAAATTTGAATCGTGTACAGCACCTCTTGTATGTGCTCCATGAGCTAGCCTCGCCTACAGGCGATGCGAATCACCGACTCGCGGCACACGGACTCAGCGCACTGACACACCATCTATCCTCATCGTATTCGTCTTCTTCATCTTCTTCTACCATAACAAACGATTCAGGGACTAAGACTTTTGCATCAGTGGACTCCAGATTCTTCCATAAGACACTCCTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCTTTTCCTAACAACATTGCAAACGCTTCAATCCTTCAATTCCTTTCCGAAGAAGAATCAAGTAGTTCGCGTACTCTTCACATCCTTGACATTGGAGTCTCCCATGGTGTCCAATGGCCTACTTTTCTTGAGGCGTTAACCCGAAGACCCGGCGGACCTCCTCCTCTGGTTCGCCTAACCGTTGTAACCGCTTCCTCCAATGAAAATGAACAGAACATGGAAACTCCTTTCTCTGTAGGTCCACCCGGTGATAACTTCTCTTCTTACCTCCTTGGTTATGCTCAAACCATTAAGCTCAATTTGCAGATAAACAGGATTGATAATCTTGAATTACAGACACTGAATTCGAAGAGTATCGACACATCTTCGGATGAAACATTTATTGTCTGTGCGCAGTTTAGGCTCCACCACTTGAATCACAGAAATCCTGACGAGAGAAGCGAGTTTCTGAAGGCTTTGAGAAGCATGGAGCCTAAAGGAGTGATACTAAGTGATAACAACATTGAATGCAGTTGCAATGGCTGTGGAAACTTCGCGGCCGGATTCTCCCGGAGAGTGGAGTACCTGTGGAGTTTCTTGGATTCCACGAGTGTTGCATTCAAGGGCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTGAAAGAATGAAGGAGGCAGGGTTTGTAGGAGGAATGCTTGGAGAGGATACCATTGATGGAGCTAGAGCTTTGTTAAGGAAATATGATAGTAATTGGGAGATGAAAGTTGAGGAGGATAACAAGTGTGTTGGACTATTCTGGAAGGGACAGGCTGTTTCTTTCTGTTCTATGTGGAAGTTGGATGGGGGAGAAAAACAAGGTAGATCAAGTTCTACATTGAATTCGCGTTTATAG 1785 0.4252 MNMEPNPTQDALDWQLEGSASFFPPFLDYPYPIQDYQFWDQNQDIICYHNQIDAGTGSPNAANGTAAVVATTATSTTCTTPSDPEPYSYNNLPVSDLPTKKRNSSDNDCSVQKPSQSHRAKKFKARSTNEVDNGDSVAEGTSVRKSGGNKKGGGKNNGNNCNNGNKEGRWAEQLLIPCALAINAKNLNRVQHLLYVLHELASPTGDANHRLAAHGLSALTHHLSSSYSSSSSSSTITNDSGTKTFASVDSRFFHKTLLKFYEVSPWFSFPNNIANASILQFLSEEESSSSRTLHILDIGVSHGVQWPTFLEALTRRPGGPPPLVRLTVVTASSNENEQNMETPFSVGPPGDNFSSYLLGYAQTIKLNLQINRIDNLELQTLNSKSIDTSSDETFIVCAQFRLHHLNHRNPDERSEFLKALRSMEPKGVILSDNNIECSCNGCGNFAAGFSRRVEYLWSFLDSTSVAFKGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCERMKEAGFVGGMLGEDTIDGARALLRKYDSNWEMKVEEDNKCVGLFWKGQAVSFCSMWKLDGGEKQGRSSSTLNSRL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01102 594 Pfam GRAS domain family 518 576 IPR005202 -
Aip09g01102 594 Pfam GRAS domain family 172 467 IPR005202 -
Aip09g01102 594 MobiDBLite consensus disorder prediction 76 166 - -
Aip09g01102 594 ProSiteProfiles GRAS family profile. 162 576 IPR005202 -
Aip09g01102 594 Coils Coil 517 523 - -
Aip09g01102 594 MobiDBLite consensus disorder prediction 76 100 - -
Aip09g01102 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 516 576 IPR005202 -
Aip09g01102 594 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 472 IPR005202 -
Aip09g01102 594 MobiDBLite consensus disorder prediction 152 166 - -
Aip09g01102 594 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 472 IPR030015 -
Aip09g01102 594 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 516 576 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01102 Aip-Chr9 15936645 15938574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01102 5 576 GRAS Transcription Factor Family AT3G13840 44.041 2.51e-141 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip09g01102 GRAS 5.4e-56 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01102 - - aip:107615113 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01102 09 15936645 15938574 Aip09g01102 09 15936645 15938574 ECH