Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01096 ATGCTGAAGCTGAAACAAAAGCCAGCAGAGGTTGCGGATGTGAAAGGTGTGGACCCAAAGGCAAAAGAGGGTGCGGTGGTGATGCGATGGTGGATTAGGAATGATAGTTGTGGACTTGTGTATTATCACCCTCACCAAATCTACCTAGATGCCATCCAAGTAACCCCTGATATCCGTGGCGAAATACGCCATTATTCAGGACGGACATTCCACAATAAACCATTCAGATTATGGAGCAAGAACAAGAAACAAATTGCAAGTTTCAACACCACTTTTGTTCTTAACATCAATCCTCAAACTTCCCCTGGTGGAGAGGGCTTGGCCTTCATCTTAACCGCAAACACCGCTCTCCCGGACGACAGTTCGGGAGAGTGGCTGGGAATTGTGAACGCCACAACTAATGGAACTTCTCAAGCTGGGGTTCTTGCTGTGGAATTTGACACAAGAAAAAGTTTTGCAGAAGATGGCCCTGATAACCACGTTGGTATTAACATAAACAGTGTCTACTCCATCAAACAGGAACCATTGTTAATCAAAGGGATTAATATTTCATCAGGTATTAATGTAACTATAACAATTCAGTATGATAATGATGTTATATCCGTGTTTGGTTCCATGAGTACAAGAACTTCGCCAATGGAGACGCTTTTGGTATCTCCACCACTTAATCTTTCTTCCTATCTTCAGGAAGAGGTTTACGTCGGATTCTCTGCTTCAACGAGTAACTACACTGAGTTGAATTGTGTTAGAGCATGGGAGTTCAGCGGTGTAGATATCATTCATGATGACAAGAACCTGTTGTGGATTTGGATAACTGGTACAACCGTTATTGTTATTATGATTGGTGGTGTTGTGTTTCTCCTAAATTGGCGAAGGAATCATGGTGTGGGAGCTTCAGGAGATGCATACCCGAGGATAGAGGATCAGATTCAACATTCATCCATGGCTCCAAAGAAGTTCCGGTTAAAGGAAATTAGAAAAGCAACGGGCGGATTCAGCCTTCAAAACAAGCTTGGTGAAGGTGGTTTTGGAACAGTTTATAAAGGGCTACTCGAAAACAAGGAGATAGCTGTAAAGAGTCACTCGAAGCATTCGCGCCAAGGGAAGCAAGAATTCATAGCCGAAGTCACAACAATCGGAAGCCTCCACCACAAGAATTTGGTCAAACTTATTGGTTGGTGCTATGAAAAAGGAGAGCTCCTTCTTATTTATGATTACATGCCTAATGGAAGCCTAGACAAGTACCTATTCGATAAGAAAAACAATTTTGGCAATGAATTTGGGGAAGGATTTAACAATTCATCAACACTAAATTGGGAAACTAGGCAGAGAGTGATATATGGTGTGGCTCAAGCATTGGACTATCTCCACAATGGTTGTGAGAAAAGGGTGATTCATAGGGACATCAAGGCCAGCAACATAATGTTAGATTCGGAATTCAATGCCAAGTTAGGAGATTTCGGATTGGCGCGAACCATTCAGAAGAGAAATGAAACTCACCATTCCACAAAGGAGATTGCAGGGACGCCAGGGTACATGTCCCCGGAAACATTCCTCACCGGAAGGGCGACGGTGGAAACCGATGTGTACGCGTTCGGCGTTCTTGTGTTGGAAGTAGTGTGCGGAAGAAGGCCAGGGAATGTGAACGGACAGGATGATTACAAGAACAGCATTGTGTATTGGGTTTGGGAGCTTCACGGAGAGGGGAGAATAGTGAGTGCTGTGGACAAAAAGATAAGTAAAGAAGAGATGAAGGATGAAGAAGCTTCTAGAGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCGCACCATAGGCCTTCAATGAGAACTGTTCTGCAAGTTCTGAACGGGGAAGCACCGCCGCCAGTGGTTCCTCAACAAAGGCCTGCTTTTGTGTGGCCTGCTGTGCCTCCATCTTTCAATAAAGGTGAAGATACTTATTCAGTCCTCAATGGACAAGTCACTCCCATATTCACTGATATCACTGGTAGGTGA 2001 0.4413 MLKLKQKPAEVADVKGVDPKAKEGAVVMRWWIRNDSCGLVYYHPHQIYLDAIQVTPDIRGEIRHYSGRTFHNKPFRLWSKNKKQIASFNTTFVLNINPQTSPGGEGLAFILTANTALPDDSSGEWLGIVNATTNGTSQAGVLAVEFDTRKSFAEDGPDNHVGININSVYSIKQEPLLIKGINISSGINVTITIQYDNDVISVFGSMSTRTSPMETLLVSPPLNLSSYLQEEVYVGFSASTSNYTELNCVRAWEFSGVDIIHDDKNLLWIWITGTTVIVIMIGGVVFLLNWRRNHGVGASGDAYPRIEDQIQHSSMAPKKFRLKEIRKATGGFSLQNKLGEGGFGTVYKGLLENKEIAVKSHSKHSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYEKGELLLIYDYMPNGSLDKYLFDKKNNFGNEFGEGFNNSSTLNWETRQRVIYGVAQALDYLHNGCEKRVIHRDIKASNIMLDSEFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMSPETFLTGRATVETDVYAFGVLVLEVVCGRRPGNVNGQDDYKNSIVYWVWELHGEGRIVSAVDKKISKEEMKDEEASRVLVLGLACCHPNPHHRPSMRTVLQVLNGEAPPPVVPQQRPAFVWPAVPPSFNKGEDTYSVLNGQVTPIFTDITGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01096 666 Gene3D Phosphorylase Kinase; domain 1 317 406 - -
Aip09g01096 666 CDD lectin_legume_LecRK_Arcelin_ConA 50 255 IPR001220 GO:0030246
Aip09g01096 666 ProSitePatterns Protein kinases ATP-binding region signature. 338 359 IPR017441 GO:0005524
Aip09g01096 666 ProSiteProfiles Protein kinase domain profile. 332 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01096 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 255 IPR013320 -
Aip09g01096 666 Gene3D - 33 265 - -
Aip09g01096 666 PANTHER - 36 647 - -
Aip09g01096 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Aip09g01096 666 Pfam Legume lectin domain 50 257 IPR001220 GO:0030246
Aip09g01096 666 SUPERFAMILY Protein kinase-like (PK-like) 313 617 IPR011009 -
Aip09g01096 666 SMART serkin_6 332 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01096 666 CDD STKc_IRAK 338 619 - -
Aip09g01096 666 Pfam Protein tyrosine and serine/threonine kinase 333 616 IPR001245 GO:0004672|GO:0006468
Aip09g01096 666 Gene3D Transferase(Phosphotransferase) domain 1 407 622 - -
Aip09g01096 666 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 36 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01096 Aip-Chr9 15741995 15745337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01096 66 635 Receptor kinase-like Gene Family AT5G55830 37.825 5.62e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip09g01096 PK_Tyr_Ser-Thr 8.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01096 - - gmx:100785031 947.192