Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01087 ATGTTGAATATGGTTCGGGAAAAGGAAGCCATTCATCCAACAAAATCAGAATTAGAAGTTTATCTTGATGAGAGTGCTTACATTCCTGAAGGCAATTCTAAATCTTTTAGTGCTTTGGAGTGGTGGAAAAATAATAGCCTAAAGTTCAAGGTTTTATCTAAAATAGCAGCGGATCCTGTCTTTAGTGCTGGAGGAAGAGTTATTGATGAATATCCTTCTCGACTAAATCAAGAGTCCATTGAAGCTTTCATTTGTGGAGGAGATTGGCTTCGGAACAAGGAAACAGACTTGGCACACAAGGTGTTCGAGAAAATGTCCGAAAGAAGTGAGGTTTCATGGAACATCATGATTGACTCTTATGCAAGTGCTGTCTCAGACGAAGATGCTCCTAACTATCACTCAATTATCCAGAACCCGATGGACATGGTAACCATAGGGTTTCCCAAACCAAACTTGATTGTAACCTCGTGTAAGCTATGGCGGCAAGTGGGAGAATCTTTCAAACCTCCTAAGACATGTACCACAGTTTCATGGACTTTCCGTGGGTTTTATGAGAAGGCACTTCTTGATTATGAAAGACATAAGATAAAAGGTGGTGAGCTGAGTGTTCCAATTCCTTCACAACCAGAGCCTATGAATATCGAAAATCAGATGATTGATGGCACCTTTTTCATCAAATTGTCTCAAGTGGCTGGTGGAGCTGTTAATCTGAAGGAAAAAGACAGTGCCGAGTTCCCTTCTATGCTTGGCCAAGATGATTCCCCACTTGGTTCAAATTCTGTTGTAATAACAAATGCTTCAATACGTGATGTACAGTTAGAGTCTGCTCATGTTCAGTTTTCTAATTCTAGTGATGCTCAGACTTTACTTGAAAAGGAAGAAAAAAATACTAATTCTAATATCCTTCCTACGAGTGTTGATAGAACTGAAGAATCACCTTCAGCTCAAGCTCTGATAAACGACGATGCAAAAGAATGGAACTCACCGGCAAGATATCCTACGGAAATGAAGAGGGAAAAGAGGAAAGCCAAGAGCAGACCATATTGGATACAATTAGTATGTTGCTCATCAGTGGATCTTCAGAGAAGGCAAAAAACTGCCATATGA 1107 0.4002 MLNMVREKEAIHPTKSELEVYLDESAYIPEGNSKSFSALEWWKNNSLKFKVLSKIAADPVFSAGGRVIDEYPSRLNQESIEAFICGGDWLRNKETDLAHKVFEKMSERSEVSWNIMIDSYASAVSDEDAPNYHSIIQNPMDMVTIGFPKPNLIVTSCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKIKGGELSVPIPSQPEPMNIENQMIDGTFFIKLSQVAGGAVNLKEKDSAEFPSMLGQDDSPLGSNSVVITNASIRDVQLESAHVQFSNSSDAQTLLEKEEKNTNSNILPTSVDRTEESPSAQALINDDAKEWNSPARYPTEMKREKRKAKSRPYWIQLVCCSSVDLQRRQKTAI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01087 368 MobiDBLite consensus disorder prediction 290 341 - -
Aip09g01087 368 Pfam hAT family C-terminal dimerisation region 17 90 IPR008906 GO:0046983
Aip09g01087 368 SUPERFAMILY Bromodomain 118 145 IPR036427 GO:0005515
Aip09g01087 368 SUPERFAMILY ARID-like 154 204 IPR036431 GO:0003677
Aip09g01087 368 Gene3D - 146 204 IPR036431 GO:0003677
Aip09g01087 368 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 154 219 IPR045147 GO:0006357
Aip09g01087 368 SUPERFAMILY Ribonuclease H-like 9 93 IPR012337 -
Aip09g01087 368 PANTHER BNAC07G06470D PROTEIN 154 219 - -
Aip09g01087 368 MobiDBLite consensus disorder prediction 290 316 - -
Aip09g01087 368 CDD ARID 146 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01087 Aip-Chr9 15511368 15519171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01087 153 204 ARID Transcription Factor Family AT1G76510 75.000 6.47e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01087 - - aip:107622719 261.922