Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01077 ATGGTGACTTATCTGATTGGGAAGGTAGGGGGGCTTCGCTGTTGCCCAATTTCTTGGGTTTGGAGGGGTTGCAAGCTGAAGATGTCCTTCAAATGGAGTTTTCTACACCTGAGGATGCAAGCGGTCTATAACAACTACAGCCGACTAAAGGGCTTTGCATCACGACGAGGTAAGACGGTTAGAAACACTGCCGGTGAGATTGTGAGGTACACGTTTGTGTGTAACCGGCAAGGATTTCGAGGGAAAAAATGGTTGGAAAAGGTTGATCGCATTCGGGAACATAAGGTAGTTACCCGATGCGGATGTCTTGCCGAGATGAGGATTAAGAGGAAAGACGGAAGCGGGAAGTGGTACGTGTCGCGTTTCGTCGAGGAGCATAATCACGAACTGGCATATGAGAAGCTTGTGGATTATTTACGGTCACACAGGAAGATTTCTGAGGTAGAAGTTGCTTAG 456 0.4781 MVTYLIGKVGGLRCCPISWVWRGCKLKMSFKWSFLHLRMQAVYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFRGKKWLEKVDRIREHKVVTRCGCLAEMRIKRKDGSGKWYVSRFVEEHNHELAYEKLVDYLRSHRKISEVEVA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01077 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 149 - -
Aip09g01077 151 Pfam FAR1 DNA-binding domain 43 131 IPR004330 -
Aip09g01077 151 PANTHER OS07G0283300 PROTEIN 43 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01077 Aip-Chr9 15423583 15424038 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01077 FAR1 8.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01077 - - aip:107620408 218.009