Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01073 ATGGATGATGAGATTGTTTCTGAGACTCCTATTCAAACTTCTGGTAGTGTTGATTCTGGTAAAAAATCTAATGTTTGGAGGTTTTTTAAGAAGATTGGAAAAGACAGAAATGGTATTGAAAAGGATGAATGCAATTTTTGTCATCATGAATACAAAATTGGAAAAAATCCGAAAACTAAGAATGCTTACGGGACTTCTCATCTAAGTCGTCATATAGTTTCTTGTAAATCTATACCCCTCAATATTAGATTTGATGATGATATAGAGGGTCTGCCAACTAAAATTGATCAGAATGTTCATAGAAAAAAACTCGCTCAGGCTATAGCAAAACATGATCTTGCGTTTAGCTttgttgagtatgaggGGCCAAACATATTGACACTACTACTGTTCTCACCGTCACTGTCCTCGCCGCTCTCTAGTCTGCGATCTCTGGTCTCTGCTCGCCTCTCCCTCATCGTCTTTCTGCTAACTGAGATGGGTGAGGAGGTGAAAGCAATTGTTCCCGAGTCTGTGCTTAAGAAGCAGAAGAGGGAGGAGGAATGGGCCTTGAAGAAAAAGGAGGAGTTTAATGCTGCAAAGAAGAAGAGAGTTGAGAGCCGCAAGCTCATTTACAGCAGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGTTGCATTTCACCTTAATATATTTCCCTTTTTCTCTGTTTTAA 696 0.3894 MDDEIVSETPIQTSGSVDSGKKSNVWRFFKKIGKDRNGIEKDECNFCHHEYKIGKNPKTKNAYGTSHLSRHIVSCKSIPLNIRFDDDIEGLPTKIDQNVHRKKLAQAIAKHDLAFSFVEYEGPNILTLLLFSPSLSSPLSSLRSLVSARLSLIVFLLTEMGEEVKAIVPESVLKKQKREEEWALKKKEEFNAAKKKRVESRKLIYSRQSNMQRNTRSRLHFTLIYFPFSLF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01073 231 SMART bed5 20 78 - -
Aip09g01073 231 SUPERFAMILY beta-beta-alpha zinc fingers 23 77 IPR036236 -
Aip09g01073 231 MobiDBLite consensus disorder prediction 7 21 - -
Aip09g01073 231 MobiDBLite consensus disorder prediction 1 21 - -
Aip09g01073 231 PANTHER OS03G0264950 PROTEIN 19 125 - -
Aip09g01073 231 Pfam BED zinc finger 23 74 IPR003656 GO:0003677
Aip09g01073 231 PANTHER OS03G0264950 PROTEIN-RELATED 19 125 - -
Aip09g01073 231 ProSiteProfiles Zinc finger BED-type profile. 20 107 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01073 Aip-Chr9 15340180 15343399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01073 163 207 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 68.889 1.32e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01073 K02937 - aip:107615124 256.529