Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01059 ATGGAGCAAGCTGAATTGGATACCTCAAAACCACCGAGTTTTCCTCCTTACCGCCGATCACACTTACGCAGCGAAACATACCTCACTCTCACTCGAATTTTCTCTCATCTTCCTGCCACACTTGATAATGGCAATGGTAAAAAGAAGCCAGAAAAAAAGGAAAAGGGACCCGAGTTCCCTGAATCTGTTGGTTCTGATTTTATACGTCCCATGAGTGCTGTCCCGATCGAAAGCATACAGGAGTTTGACGAGACTGTTGAAGGGACTGGAAACAAGGGCAGGGTATGTGTTGTCAATGATATTGTTTTGGGTGATATAGAGGAGATGATGGGAATAGAAGAAGTTGAGGATACTTCGAGGACGCTGCTGCAGGACAGGTGTAACGATGCAGATAAAGAGCAACAAAGGATAATGGATGAGTTGGAACTGGTTGTGAATGGAACACAAAATATTGTTCGTGATAGTGGTTTAATCTCTTTGAGTGCAGGGTCAGGTGAGGAACAGAATGGCAGCAATGCAGGTGAGATGCAAGTACAAGGCTCAACGGATTCTCTTCCAAATTCTAAAGAAGCTGAAGTTGAGAAGGTAGAGCTGGATTATGAAGATGAAAGGCTGCTGGATTATGATAATTTGGAAGATAAATGTGAAATGAAAAATGAAAGAAATTTAGAAAAGTCAACTTGTGTAAACAATGCATCAATTTCTTCAAATATTCATATTGAAAACGAGGACATAGAAGAGGGAGAACTTGTTGGAGACTTTGGAGTGGATTGTAATTCGTTTGACATGCCTACTGCAGATTCATTTATTCCTCAAACGAAAATTGATGAGGTTCAGAACCCCGAAAGTATTAATATGGGGAATACAGAAAAAGAAGGTTTAGGCAAAGAAATAGGTAGTAAACCGGTTACTGACGTATTGGAAGAAGACTCTGACCAAGATCATGGAAACCCTGCTGCATCAGAGAAGGTTGATGTCAGCTGTAAAAAAAAGCGTGGCCCTGGTTCTGCGGAAAAGAAAGCAAAAAAGAAGAAAAAAGCGCGGAAAAAACGGGCAGAAAAGAACAAACAACTTGGTGTTAAAAGGTTGAAGTTGTCTCTAGTACAACAGAAACCAAAAACCATCTCTTATTGTCGCCATTTTCTTGTTGGAAGATGCTATGAGGGTGACAAGTGCCATTTTTCACATGATACAGTGCCTTCTACCAAATCAAAGCCATGCTCCTTTTTCGCTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGACCATCAACTCTCCAAGTATCCTTGTGTTAACTTTGTGTCCGGAGGTTTTTGTGTCAGAGGTGATGCATGCTTGTTTTCGCACCAGTCACCAGCCAAGGAAGATTTTGCTACACCTTCAAGGGTTCACAAACCAGGAATGGAATCTCCACACTTTTCAGGAAACACAAATTCCAACATGCCACCTAACATTCATGGCTGTAGTTCTATCCAACAAAACCATTTGATCAATCCTCCAAGAGTTCATTCTGACATCAATTCGGAACATAAAGCGACAAACACTGTACAGAAACAGCTTAAGCTTGCATCTAAAGGAGTTAGTTTCGTCGATGTTGCAAAGCTATCATTGCCTTCTCCTACTACGCCAAAGGAAGGCATGACCAAAGTTGGCTCATCCTCTTCTGACCAAAGTACATCTGGAACAAATCAAACCTTGGTTGAAATTCCAAAGAAATTGCCAGCTAGGATTCCAAAGGGAATTAACTTTCTTGCTTTTGGGAAAGATCCTGTGTGCAGTTTTAAGAGTTCTGTTAACTCCCTTGTAATTGGGGAAAATAGTTTCAGTTTGTTTGATCATACTAGTTCATCCTTAAAAGATGCAACAAAAGGAAGAGTACCACCGACTGATTTAGTCTCCGGTGAGATTTCTGGTAAAAATCAATCGGTGGCAGAAAGTATAAAATCGAGTTTTCCAGGAAAAGCTTCAATGAATGATGCTTCAACTGGTTTACAAGGTAGCTCTCATGTGGATGACGACGGAAGTAAACCAGTCCAAGAGGCAAGTGGGGCATCTGATTCTTTTCAAATTTCCGCAGCAACACTGTCGCCATTTATGCGTCTGGTTTCTCCTTCATCTTCAGAACAGCTACCATCTAGAAAGGAGCTCTTGTCGACTGTCTTGTCATTTGCAGCAGAGCATGAATCAGTTATCAAGATGAAAGATTCTGCTGGCACTTCAACTGCATAA 2235 0.4143 MEQAELDTSKPPSFPPYRRSHLRSETYLTLTRIFSHLPATLDNGNGKKKPEKKEKGPEFPESVGSDFIRPMSAVPIESIQEFDETVEGTGNKGRVCVVNDIVLGDIEEMMGIEEVEDTSRTLLQDRCNDADKEQQRIMDELELVVNGTQNIVRDSGLISLSAGSGEEQNGSNAGEMQVQGSTDSLPNSKEAEVEKVELDYEDERLLDYDNLEDKCEMKNERNLEKSTCVNNASISSNIHIENEDIEEGELVGDFGVDCNSFDMPTADSFIPQTKIDEVQNPESINMGNTEKEGLGKEIGSKPVTDVLEEDSDQDHGNPAASEKVDVSCKKKRGPGSAEKKAKKKKKARKKRAEKNKQLGVKRLKLSLVQQKPKTISYCRHFLVGRCYEGDKCHFSHDTVPSTKSKPCSFFARHSCMKGDDCPFDHQLSKYPCVNFVSGGFCVRGDACLFSHQSPAKEDFATPSRVHKPGMESPHFSGNTNSNMPPNIHGCSSIQQNHLINPPRVHSDINSEHKATNTVQKQLKLASKGVSFVDVAKLSLPSPTTPKEGMTKVGSSSSDQSTSGTNQTLVEIPKKLPARIPKGINFLAFGKDPVCSFKSSVNSLVIGENSFSLFDHTSSSLKDATKGRVPPTDLVSGEISGKNQSVAESIKSSFPGKASMNDASTGLQGSSHVDDDGSKPVQEASGASDSFQISAATLSPFMRLVSPSSSEQLPSRKELLSTVLSFAAEHESVIKMKDSAGTSTA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01059 744 SMART c3hfinal6 429 453 IPR000571 GO:0046872
Aip09g01059 744 SMART c3hfinal6 373 398 IPR000571 GO:0046872
Aip09g01059 744 SMART c3hfinal6 401 427 IPR000571 GO:0046872
Aip09g01059 744 MobiDBLite consensus disorder prediction 45 60 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 543 565 - -
Aip09g01059 744 SUPERFAMILY CCCH zinc finger 372 397 IPR036855 GO:0046872
Aip09g01059 744 Gene3D - 366 429 - -
Aip09g01059 744 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 173 684 IPR045124 GO:0003723|GO:0045892
Aip09g01059 744 MobiDBLite consensus disorder prediction 276 355 - -
Aip09g01059 744 Pfam CCCH-type zinc finger 378 397 IPR041367 -
Aip09g01059 744 PANTHER PROTEIN SUPPRESSOR OF SABLE 173 684 - -
Aip09g01059 744 ProSiteProfiles Zinc finger C3H1-type profile. 372 399 IPR000571 GO:0046872
Aip09g01059 744 ProSiteProfiles Zinc finger C3H1-type profile. 401 428 IPR000571 GO:0046872
Aip09g01059 744 SUPERFAMILY CCCH zinc finger 430 453 IPR036855 GO:0046872
Aip09g01059 744 ProSiteProfiles Zinc finger C3H1-type profile. 431 454 IPR000571 GO:0046872
Aip09g01059 744 Coils Coil 337 357 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 619 641 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 294 334 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 1 21 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 653 688 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 335 355 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 653 671 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 39 66 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 161 187 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 539 565 - -
Aip09g01059 744 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01059 Aip-Chr9 14977331 14981892 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aip09g01059 zf-CCCH_4 2.8e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01059 - - adu:107464618 1328.15