Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01055 ATGAATAAACCGAATAGACCGCAGGCCAGTTGGGCAGGTGGACTTGATGCGGTGCCGCCGAAAGGAGCCACACGCTGGGAATGCGCTTCTGGGCGTTCACCGGTGCGGATCTCGACGTCTCCGGGAACGACTTCCGGTGATAACACACGAGCCAGTGAGAAGATGAGATACTTCTCCTCTTCTTTCACCATCCAACACACCCTTCCACTTGAATACGTACATAACTCTATTGATAGAAATACAATGGCTGTTCCAAAAGTGAATGAAATGTTGCTTCTAGACCTTGAAGAAATGGGATTTCCACGGTCACGAGCCACCCGGGCACTTTATTATTCAGGCAACAAGAACTTAGAGGATGCAATACATTGGACAATTGATCACGAAAATGACCCTGATATTGATGTGTTGCCACTGGTAGATGTAGACATTGATATTGATTCTCCTCAATCCTTTCCTATCACGGAAGAAATCAGAATCAAAGCTCAGAAGTTAAGGGAACAAGAGCATAAGAAAAAAGAGGAGGAACTAAAAAGATTGGAGAGAGAACGGGAGAAGGTAAAACCACTTTCGCAACGTTTGATCCATATTACCGACCCTATACACACCTTGAGAAAAGCAGAAAAGGAAGAAGAGAAAAAGGCAAGGGAAAATGTTCTCCAAAAACTACAACAGGACAAGATAAATAGAAGATCTAAGCATGAATCAATATTGCCTATAGATAGCCTAGCCAATGTCAGATCATCTGCTACTACTTTCGAACAGCAAGATAAGAATCCAAAACCTGTTTCCACAATTGAAAAGGTTGATTACTTAAGGGAATGTTTGAGGTCTCTCAAGCGTAAACACCAGGCCGAGCATGGGAGAGTCAGAAAGGCCTTCGAAACACTTTCAATTTATGTTCGAAATGTTGTCAAGAATCCAAACGAGGAAAAGTACAGGAAGATCAGACTAAGCAATCCATTATTCCAAGTATGA 975 0.4267 MNKPNRPQASWAGGLDAVPPKGATRWECASGRSPVRISTSPGTTSGDNTRASEKMRYFSSSFTIQHTLPLEYVHNSIDRNTMAVPKVNEMLLLDLEEMGFPRSRATRALYYSGNKNLEDAIHWTIDHENDPDIDVLPLVDVDIDIDSPQSFPITEEIRIKAQKLREQEHKKKEEELKRLEREREKVKPLSQRLIHITDPIHTLRKAEKEEEKKARENVLQKLQQDKINRRSKHESILPIDSLANVRSSATTFEQQDKNPKPVSTIEKVDYLRECLRSLKRKHQAEHGRVRKAFETLSIYVRNVVKNPNEEKYRKIRLSNPLFQV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01055 324 Coils Coil 154 189 - -
Aip09g01055 324 Pfam PUB domain 289 323 IPR018997 -
Aip09g01055 324 Pfam UBA/TS-N domain 94 123 IPR015940 -
Aip09g01055 324 Gene3D - 89 133 - -
Aip09g01055 324 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 86 127 IPR015940 -
Aip09g01055 324 PANTHER PUB DOMAIN-CONTAINING PROTEIN-RELATED 82 323 - -
Aip09g01055 324 SUPERFAMILY PUG domain-like 273 323 IPR036339 -
Aip09g01055 324 CDD UBA_PUB_plant 87 134 - -
Aip09g01055 324 MobiDBLite consensus disorder prediction 33 51 - -
Aip09g01055 324 MobiDBLite consensus disorder prediction 1 51 - -
Aip09g01055 324 Gene3D - 273 324 - -
Aip09g01055 324 Coils Coil 205 225 - -
Aip09g01055 324 PANTHER F13M7.16 PROTEIN 82 323 - -
Aip09g01055 324 SUPERFAMILY UBA-like 85 135 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01055 Aip-Chr9 14938410 14947925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01055 82 323 C2H2 Transcription Factor Family AT1G04850 41.065 4.31e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01055 - K24348 gmx:100781260 241.891