Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01050 ATGCTTTTTTCTACCTTGACAACCATCTTTCTTTTTTGTGTAACATTGCCATTGATTCACCCGACAATAACCGCCGCTACCACCACCTTAGGAAATGAGACCGATTTTATGACATTACTTCAAATTAAAAAATCAATATCAAGTGACCCTTATGGAATTTTGATGTCATGGAATACTTCTAACCATTTTTGCAGCTGGGGTGGAGTCACATGTGGCATCAAACATCAAAGAGTTGTGATGTTGAACCTTAAAGAGTATCATTTGAGTGGGACCATATCTCCTTATATTGTCAACCTTTCTTTCTTGAGAATTCTCAACCTTCTTAGCAACAAATTTTATGGAGAAATTCCAAGAGAGTTGGGCCGTTTGTTTAGACTAAGGAAACTCAACCTTTCAAACAACAATTTGACAGGGGAGTTTCCTATTAGTTTAACTAATTGCTCTAAACTAAGATACTTAAATTTTTCAGCAAATAGTTTTCATGGAAAAATACCAATTGAGGTTGGTTCTCTTAAGAAATTAGAAAAGTTGAGTCTTTTTAAAAACAATTTTGGTGGGAAAATTCCACCCTCCATAGGAAATATCTCTTCCCTTGATGTCTTTTCCATAGCAGTTAATAACTTGGAGGGAAAGTTACCTGAAGAATTGGGACAACTGAGAAAGTTGTCCATGTTAGTGATACTTACAAACAGGCTTTCTGGTATGCTTCCTTCTTCATTTTGCAATATGACATCTCTTGCTTTCTTCTCAGCCGCGGAGAACCAATTTCACGGCTCGCTTCCGGCCGGCATGTTCTCCGCCCTCTCGAATTTGCAAATGTTTGAAATTGGAATGAACCAAATTTCAGGTCCAATCCCAACTTCAATTGCAAATGCATCTTTGCTTCAAATATTTGATATTGGTTTAAACAACTTTGTTGGACAAGTTCCATCTCTTGAAAAATTGCAACATCTTACCTGGCTAAACTTAAATGACAACAATCTTGGCAGTGGTTCAGATGGTGATTTGGACTTTATAACATCTTTGGTTAATTGCACCGAATTGGAAAACTTGGTTCTTGGTTCCAACAAGTTGGGGGGTATTTTACCCATCTCAATAGGCAATTTGTCCACCCAACTCATTGAAATAAGTCTCTTTGTTAATCACATACATGGAACTATTCCTGAAACAATAGGAAATAACATAAATTTAATTTCTTTGTATTTGGGTGACAACCACTTTAGTGGGAATGTTCCAAATTCTTTTGGAAAGTTTCATAAGATGCAATCTCTAGATGTGGGGCAAAACCACCTTTTAGGTGAGATACCTCCCTCCTTGGGAAATCTCACTCAATTGGTTGAAATAAATATTTCAAACAATATGTTGGAAGGAAAATTTCCACCCATTATTGCAAACTGGCAAAAATTGCAGATTCTAGACTTTTCTAGAAACAATTTTACTGGTGAGATACCTCAGCAGATTTTTGGACTTCCTTCCTTGTCAATATTTTTGAACTTATCTCATAACTCATTCAATGGCAATCTATCTGTTGAAGTGGGATCCCTTTCAAGCCTTGACACTTTAGATATCTCCCATAACTATCTCTCCGGGGAGATTCCGGAGACGATTGGCGAGTGCAAAAGCATGGAGTATCTGGATTTACATGGGAATTCCTTCAATGGAGTGATACCTTCATCAATAGCTTCATTGAAAGGACTTACTCATTTGGATCTCTCACTAAACAATTTGTTTGGAACAATTCCAACAGATTTGCAAAGCCTTTCATTTCTAACATACTTGAATCTTTCTTTCAATAACTTGGAGGGCAAGGTACCAATAGAGGGTGTTTTCAAGAACGCGAGCGCAATATCAATAGCCGGTGATCATAATCATCTTTGTGGTGGTATATCAGAGTTGAATCTAGCAGCATGCCCTGCTACTATTGTGTTAAGAAGAAACAAGCACCATAATTTGAAGCAAGTAGTAATCATCATTTGTGTGATTGTTTGCTTTCTGTTATTTTCAACTCCTGTCTTGTGTTATTGGATCAAGAAGAGAAAAAGACCATCATTTTTATCATCTTCCAAGTCATCAATATTCCAGCTTCCTATGGTGTCATACAAACTTCTACACCATGCAACAGAGGGGTTTTCCACTAACAACTTGATTGGATTTGGAAGCTTTGGTTCTGTCTACAAGGGATTTCTACAATCTGAACAGAAGTTTGTTGCTATAAAGGTAATGAACATGGAAACGAATGAAGCCAACAAGAGTTTCATTGCTGAATGTAATGCACTGAAGTTTATGAGGCATAGAAATCTTGCAAAGATTTTAACTTGTTGCTCAAGCATTGATTTCAAAGGCAATGATTTCAAAGCATTGGTGTTTGAGTACATGGCTAATGGAAGCTTAGAAAAGTGGTTGCAACCTTGTGGTGAAAGCATTGAAGATCAATCAGATCCATTGGAGCTTGCTCAAAGATTGAACATTCTAATTGATGTGGCAAATGCATTACATTATCTTCACTATGAATGCGAGCAACCAATCATTCACTGTGATTTAAAGCCAAGCAATGTGCTCCTTGATGATCACATGGTTGGTCACGTGACTGATTTTGGAGTTCCAGAGGATGACAATGAGAAGAAAGAAGAGGTGACGAAGAAGAAGGCAGATTTTCTGTTTCTGGCGAACAGCATAGATGAAGAACAAGAAATCAGAGACAACGCCGGCTGTGCATGCAAGCTTCTGGTCACAGAGTAA 2739 0.3757 MLFSTLTTIFLFCVTLPLIHPTITAATTTLGNETDFMTLLQIKKSISSDPYGILMSWNTSNHFCSWGGVTCGIKHQRVVMLNLKEYHLSGTISPYIVNLSFLRILNLLSNKFYGEIPRELGRLFRLRKLNLSNNNLTGEFPISLTNCSKLRYLNFSANSFHGKIPIEVGSLKKLEKLSLFKNNFGGKIPPSIGNISSLDVFSIAVNNLEGKLPEELGQLRKLSMLVILTNRLSGMLPSSFCNMTSLAFFSAAENQFHGSLPAGMFSALSNLQMFEIGMNQISGPIPTSIANASLLQIFDIGLNNFVGQVPSLEKLQHLTWLNLNDNNLGSGSDGDLDFITSLVNCTELENLVLGSNKLGGILPISIGNLSTQLIEISLFVNHIHGTIPETIGNNINLISLYLGDNHFSGNVPNSFGKFHKMQSLDVGQNHLLGEIPPSLGNLTQLVEINISNNMLEGKFPPIIANWQKLQILDFSRNNFTGEIPQQIFGLPSLSIFLNLSHNSFNGNLSVEVGSLSSLDTLDISHNYLSGEIPETIGECKSMEYLDLHGNSFNGVIPSSIASLKGLTHLDLSLNNLFGTIPTDLQSLSFLTYLNLSFNNLEGKVPIEGVFKNASAISIAGDHNHLCGGISELNLAACPATIVLRRNKHHNLKQVVIIICVIVCFLLFSTPVLCYWIKKRKRPSFLSSSKSSIFQLPMVSYKLLHHATEGFSTNNLIGFGSFGSVYKGFLQSEQKFVAIKVMNMETNEANKSFIAECNALKFMRHRNLAKILTCCSSIDFKGNDFKALVFEYMANGSLEKWLQPCGESIEDQSDPLELAQRLNILIDVANALHYLHYECEQPIIHCDLKPSNVLLDDHMVGHVTDFGVPEDDNEKKEEVTKKKADFLFLANSIDEEQEIRDNAGCACKLLVTE 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01050 912 Gene3D Ribonuclease Inhibitor 263 333 IPR032675 -
Aip09g01050 912 SUPERFAMILY Protein kinase-like (PK-like) 688 867 IPR011009 -
Aip09g01050 912 Gene3D Transferase(Phosphotransferase) domain 1 792 895 - -
Aip09g01050 912 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Aip09g01050 912 Gene3D Ribonuclease Inhibitor 198 262 IPR032675 -
Aip09g01050 912 Gene3D Ribonuclease Inhibitor 144 197 IPR032675 -
Aip09g01050 912 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Aip09g01050 912 Pfam Leucine Rich Repeat 396 418 IPR001611 GO:0005515
Aip09g01050 912 SMART serkin_6 710 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01050 912 Pfam Protein kinase domain 711 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01050 912 SMART LRR_typ_2 123 147 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 587 612 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 563 586 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 466 490 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 515 539 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 315 338 IPR003591 -
Aip09g01050 912 SMART LRR_typ_2 418 442 IPR003591 -
Aip09g01050 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Aip09g01050 912 SUPERFAMILY L domain-like 371 621 - -
Aip09g01050 912 PANTHER OS04G0122200 PROTEIN 21 867 - -
Aip09g01050 912 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Aip09g01050 912 Pfam Leucine rich repeat 542 600 IPR001611 GO:0005515
Aip09g01050 912 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Aip09g01050 912 SUPERFAMILY L domain-like 35 328 - -
Aip09g01050 912 Gene3D Ribonuclease Inhibitor 334 635 IPR032675 -
Aip09g01050 912 ProSiteProfiles Protein kinase domain profile. 710 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01050 912 Gene3D Phosphorylase Kinase; domain 1 692 791 - -
Aip09g01050 912 PANTHER LRR RECEPTOR-LIKE KINASE 21 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01050 Aip-Chr9 14891643 14896908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01050 32 869 Receptor kinase-like Gene Family AT3G47570 45.498 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip09g01050 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01050 - - ahf:112708871 1025.77