Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01049 ATGGGGTCCGTTAACGACGGCACACAACGAAAACGTGAGCCGAAGGCGGAGACCAGATGCGGCTGTGAGGCAGAGATGCGCGTCCACGTGCACTCCGAAAGTGGTAGATGGATAATATCACACTTTCAGGACGTTCACAACCACGAGTTGCTGGATGATAGACTGACTTTCATGCTACCGGGCCATAGGAAAATGGATGCAGCCGCCTTAGAACAAATGAACATGATGCTTAGAGTTGGGATTAAAACGCCACAGATTTATTCATCTTTTGTGCAAACTTCCGGGAAATTCCAAAACCTTCCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGCAACAGAGGCTCATTGGCGGGGACGCGATGGCTTGCCTTAAGTTCCTAGAATCAACGGTGCAGGCCAATATTGGAATGTTTGTGCGTTATTTGGCGGACAAAAAGGGTCGTTTGGTGCACCTATTTTGGTCGGATAATTGCAGTCAGCTGGATTATGGTTTGTTTGGGGATGTCGTCGCATTTGATGCGACATATCGGAAGAATAAGTATATGTGTCCACTGGTTATGTTTTCTGGAGTGAATCACCATAACCAAACAATTGTGTTTGCGGCTGCGCTAGTTGCAAATGAGAATGAGCAGACTTACACCTGGTTGTTGCAACAGTTCCTGGACGCCCTGAAGGGTAAAGCACCTGGGTGTGTGATAACAGATGGTCATGGAGCGATGAAAAAGGCAATCAAAGTGGTGTTTCCTGGGGCCTATCACCATTTGTGTGCATGGCATCTGCTGAGAAATGCCACTTCTAACCTAAGCAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGATGTTCGATTATGACGTGTGGGAGTTTGAAGATCATTGGCATTATATGGTGGATGCGCTTGGTCTGTCAGATAATCAATGGGTTTCTGACCTTTACTCTAGGAGAAGGATGTGGGCAATTGCACAAATAAGGGACAACTTCTTTGGGGGTTTTCGTACAACGTCAAGGTGTGAAGGATTGCACTCAATGCTGGGTAAATTTGTCCAGTCTTGCCATAACTTGAGAGACTTTTTTGAGCAATTTATGCGTTGCATATCCCAAATGAGGTCCAGGGAAGCACACTCTGATCTGTTATCCGTGGTTAGGGAACCAGTGCTACAGAGTCCATTTCTTGATTTGGAGAGGTCAGCTGCAAAGAAGCTCACAAGGGCAATTTTCTTCAACTTCAGGCCCATGCTTTTCCGCGCTTGCACACTGAAGGTACGAACACACACATGGAGCCAGACTTCTGATACATTCACTTTGTCTAGGTCAGCTAATGCGCGTAGGGAGTGA 1344 0.4606 MGSVNDGTQRKREPKAETRCGCEAEMRVHVHSESGRWIISHFQDVHNHELLDDRLTFMLPGHRKMDAAALEQMNMMLRVGIKTPQIYSSFVQTSGKFQNLPFLKRDMYNQIGKQQRLIGGDAMACLKFLESTVQANIGMFVRYLADKKGRLVHLFWSDNCSQLDYGLFGDVVAFDATYRKNKYMCPLVMFSGVNHHNQTIVFAAALVANENEQTYTWLLQQFLDALKGKAPGCVITDGHGAMKKAIKVVFPGAYHHLCAWHLLRNATSNLSNPRFTSEFKKCMMFDYDVWEFEDHWHYMVDALGLSDNQWVSDLYSRRRMWAIAQIRDNFFGGFRTTSRCEGLHSMLGKFVQSCHNLRDFFEQFMRCISQMRSREAHSDLLSVVREPVLQSPFLDLERSAAKKLTRAIFFNFRPMLFRACTLKVRTHTWSQTSDTFTLSRSANARRE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01049 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 424 IPR031052 GO:0006355
Aip09g01049 447 Pfam MULE transposase domain 171 265 IPR018289 -
Aip09g01049 447 Pfam FAR1 DNA-binding domain 6 51 IPR004330 -
Aip09g01049 447 PANTHER OS02G0262500 PROTEIN 8 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01049 Aip-Chr9 14887974 14889317 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01049 MULE 1.6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01049 - - aip:107627027 756.518