Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01048 ATGTTCTTCCCTTCAATGCGACTCCTTTTCTTTTATGTATTCTTTGTGGGGCTTAAACCTTCATTAGCCACCAACATTTTAGGAAATGAGACTGATGTTATAGCATTGCTTCGGTTTAAAGAATCAATATCCAACGATCCATATGGAGTTTTAAGCTCATGGAATGCTTCAAGCCACTTCTGCAACTGGCATGGAATCACATGCAGCATTAAGCATCAAAGAGTGCAACAGTTGAGCCTTCAACAATGTCGTTTGTTCAGATTACAACAACTCTACCTCCCGGATAACAAACTGACAGGAGAGTTTCCTGTCAGTTTGGCTAATTGCTCGGAGCTAAGGCTTCTAAACATGTCGAGTAACAATCTCTACGGCCAAATACCAATGGAGATTGGCACTCTTAAGAAGCTTGAAAAGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATATGGAATATCTCTTCTCTAAGTATTCTTTCTATGGGTTATAATTACTTGGAAGGCAAGATACCTGAAGAAATTGGAAAATTAAAAAGCTTATCAGGTTTTGCCATTGGTGCCAATAAACTGTCCGGGGAGCTTCCTTCTTCGCTTTACAATCTGTCCTTGCTCGCTCTTTTCTATGCTGCAGAAAACCAGTTTCATGGCTCTCTTCCATCCAACATGTTCTCCAACCTCATCAGTCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATTCCAACTTCTATTTCAAATGCATCTTCACTTCAACTTTTTGATATTGGCTATTGTAGTTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACAATCTTGGTAGTAATTCAGCTCTAGACTTGGATTTCATAACATCTTTGATTAATTGTACTGAATTGGAAAGTTTGGTTTTGTGTTCCAACAATTTTGGAGGTGTTTTACCCAACTCCATAGGGAATTTGTCAACTCAACTCACTGAAATTAGTCTTGATTTTAATCACATACATGGAACTATCCCTGAAACTATATGCAATAACATAAACTTAATTACCTTGAATTTGGAATATAACCACCTTACTGGGTTTGTTCCAAATTCTTTTGGAAAGTTTCAGAAAATGCAACTATTGAGTTTGGGTGCAAACCACCTTATTGGTGACATACCTTTCTCCTTGGGTAACCTCACTCAACTGGTTGAAATAAGAATTTCAAACAACATGTTGCATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTAGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAGGTTTTTAGCCTTTCATCCTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTATCTATCTGGCCAGATTCCTATGACTATTGGAAAGTGCACAAGTATGGAATATTTAAACTTACATGGTAATTCTTTCAGTGGCATGATACCTTCATCAGTAGCTTCATTGAAAGGCCTCTCTCATTTGGATCTCTCGCAAAATAACTTGTCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTTTTCTAACATATTTGAATGTGTCTTTCAATATGCTAGAAGGGAAGGTACCATTGGAGGGTGTATTCAAGAATGCAACTTCAATTTCAATTGTTGGTAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAACGTTATGGCAAGAAGCAATCACCATAATTTGAAGCTAGCCATAATCATAATTTGTGTGGTTGTATGCCTTATTTTGCTTTCAATTGTTGTTGTTGTTTTCTTGAGCAAGAAGAAGAAAAGAACATCATCTTTGACAGCATCAACAAATCAGTATTCAATGGTGTCATACCAAATCCTACATCATTCAACAGAGGGGTTTTCTACCAGTAACTTGATTGGATCTGGCAGCTTTGGTTCTGTGTATAAAGGATTCCTTGAATCCGAACACAAGTTCGTCGCCATAAAGGTGATAAACCTACGAATGAGTGGAGCTCACAAGAGTTTCATTGCCGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCTCGAGCATAGATTATAGCAGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTACATTATCTTCACTATGGATGTGAACAACCTATTGTTCATTGTGATCTAAAGCCAGAGAATGTGCTTCTTGACGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTGTGTTCAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTGACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCAAACAATCTTCTAGAGATTATGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAATTGGACTTGCTTGTTCAGTTGAATCCCCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAATCTTACCAAGGATGTATTTCTTCAACATTGA 2913 0.3762 MFFPSMRLLFFYVFFVGLKPSLATNILGNETDVIALLRFKESISNDPYGVLSSWNASSHFCNWHGITCSIKHQRVQQLSLQQCRLFRLQQLYLPDNKLTGEFPVSLANCSELRLLNMSSNNLYGQIPMEIGTLKKLEKLSLNKNNYSGEIPSSIWNISSLSILSMGYNYLEGKIPEEIGKLKSLSGFAIGANKLSGELPSSLYNLSLLALFYAAENQFHGSLPSNMFSNLISLQEIGIGGNQISGPIPTSISNASSLQLFDIGYCSFVGKVPNLGNLKDLYWLNLNYNNLGSNSALDLDFITSLINCTELESLVLCSNNFGGVLPNSIGNLSTQLTEISLDFNHIHGTIPETICNNINLITLNLEYNHLTGFVPNSFGKFQKMQLLSLGANHLIGDIPFSLGNLTQLVEIRISNNMLHGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNYLSGQIPMTIGKCTSMEYLNLHGNSFSGMIPSSVASLKGLSHLDLSQNNLSGSIPTDMQRLSFLTYLNVSFNMLEGKVPLEGVFKNATSISIVGNNKLCGGVLQLHLAPCPANVMARSNHHNLKLAIIIICVVVCLILLSIVVVVFLSKKKKRTSSLTASTNQYSMVSYQILHHSTEGFSTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLRMSGAHKSFIAECNALKFIRHRNLVKILTCCSSIDYSSQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVVDVASALHYLHYGCEQPIVHCDLKPENVLLDDDMVAHVTDFGLARLLSMTNGDPHNQSSTTVFKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMFKDDNNLHNYVKMAYSNNLLEIMDSTLLPKQIGEEENYTKKLTMCVFSLIRIGLACSVESPNERMNMADVTRELNLTKDVFLQH 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01048 970 PANTHER OS04G0122200 PROTEIN 19 81 - -
Aip09g01048 970 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Aip09g01048 970 Pfam Leucine rich repeat 334 393 IPR001611 GO:0005515
Aip09g01048 970 Gene3D Ribonuclease Inhibitor 25 84 IPR032675 -
Aip09g01048 970 SUPERFAMILY L domain-like 333 588 - -
Aip09g01048 970 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Aip09g01048 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Aip09g01048 970 CDD STKc_IRAK 673 961 - -
Aip09g01048 970 SMART serkin_6 667 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01048 970 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Aip09g01048 970 PANTHER LRR RECEPTOR-LIKE KINASE 19 81 - -
Aip09g01048 970 PANTHER LRR RECEPTOR-LIKE KINASE 83 968 - -
Aip09g01048 970 SUPERFAMILY L domain-like 30 332 - -
Aip09g01048 970 Pfam Protein kinase domain 669 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01048 970 SUPERFAMILY Protein kinase-like (PK-like) 641 961 IPR011009 -
Aip09g01048 970 ProSiteProfiles Protein kinase domain profile. 667 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01048 970 Gene3D Phosphorylase Kinase; domain 1 629 748 - -
Aip09g01048 970 Gene3D Ribonuclease Inhibitor 293 597 IPR032675 -
Aip09g01048 970 Gene3D Ribonuclease Inhibitor 85 292 IPR032675 -
Aip09g01048 970 Gene3D Transferase(Phosphotransferase) domain 1 749 967 - -
Aip09g01048 970 PANTHER OS04G0122200 PROTEIN 83 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01048 Aip-Chr9 14857508 14860682 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01048 22 969 Receptor kinase-like Gene Family AT3G47570 43.618 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip09g01048 Pkinase 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01048 - - ahf:112708871 1290.79