Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01045 ATGGTGTCATACCAAATCCTACATCATTCAACACAGGGGTTTACTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTCTGTGTATAAAGGATTCCTTGAATCTGAACACAAGTTTGTCGCCATAAAGGTGATAAACCTTCAAATGAGTGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCACGAGCATAGATTATAGCGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTATCGATGTGGCATCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGGTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTGTGTTAAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTGACCGGAAGGAGGCCAATGGAAGAAATGTTAAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCACACAATCTTCTAGAGATTACGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAGTTGGACTTGCTTGTTCAGTTGAATCACCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATGTATTTCTTCGAGATTGA 954 0.3795 MVSYQILHHSTQGFTTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCTSIDYSGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVIDVASALHYLHYGCEQPVVHCDLKPENVVLDDDMVAHVTDFGLARLLSMTNGDPHNQSSTTVLKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMLKDDNNLHNYVKMAYSHNLLEITDSTLLPKQIGEEENYTKKLTMCVFSLIRVGLACSVESPNERMNMADVTRELNLTKDVFLRD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01045 317 Pfam Protein kinase domain 15 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01045 317 ProSiteProfiles Protein kinase domain profile. 14 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01045 317 SMART serkin_6 14 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01045 317 Gene3D Transferase(Phosphotransferase) domain 1 96 314 - -
Aip09g01045 317 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Aip09g01045 317 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Aip09g01045 317 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 315 - -
Aip09g01045 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Aip09g01045 317 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 315 - -
Aip09g01045 317 SUPERFAMILY Protein kinase-like (PK-like) 3 308 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01045 Aip-Chr9 14848914 14850047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01045 2 316 Receptor kinase-like Gene Family AT3G47090 50.314 4.10e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip09g01045 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01045 - - ahf:112775141 642.884