Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01042 ATGCAACCCACTAAAGAAGTAGCTTCAACTGCTGCAAATCTCAACATGTTGAACCATCAACAACAATTCTTGAGGGGTTTGCCTCAACAACAACAACAACTGCCAATGCCACAAATTCCAGTGCAATTCCAACAACAAAAAAACATTCTTCCAATCTATCAATCCGGAGTTTGTGCAAAAAAGATGCAAGAATTTGTCCATTGCCAGCAGCGCCGGCCGGCCGACAACAACATTATCTTCTGGAAGAGATTTGTGGCCGAGTTTTTCGCTCCGAATGGTAAGAAGAGCTTCTGTTTCTCCTTGTATCCAAGAACAAAAACCAGAGCCAATTTTCCCCTTGGTGGTATGAAAAAATGTGATATATGCAAGAAGAATCCTGTTAATGGCTATGAAGTGTGTTTTGATGTTCTTCCAAGGCTTTTAATGGTGAAATATGAAAGTGGACTATTGGAAGAGAGGCTTTTTACCGACATTCCCTGCGAATTCAGAGACCCTTCCGGCTACATTGTTCTGGTCTGCAAGAAAGCAAGAAGAGAAAGCTTGTTCCACAAGTTTCACGTCGTCCACGAAGGTTCCATTCGAATAGTCTTCTCCCCTTACATCAAGATATGTTCTTGGGAATTCTGCGTGACGCGCCACGAAGTGTTCATTAGCAGAAGGCATTTGGTTCCTAATGTGAATCAAATTGGCGATGCCATATCAAAGTTCCGGGATTTCGCAGCCAATAATAATGACAACAATAATGTTGCTGCTGAGGAGTTTCAAGAAAGTAGCAGTAAGTTGGTTGCAGTAACACAAGAATTGGCTAAGAAATTGGAAGTTCCAATGCTTGATGATTATTCGGGGTTTGCTAAGAGCTATGTTAGGTGCCTTCAATTATCAGAAGTTGGGAACTTCATGAAAGACATGATTGATTTCAGCATACGGAATAAGATTGCACCTATTGAGAGCTTGGCCAAATTCCCAAAGAAACTTAGAATTGCTGATCATGGTGAAGATCAATTGCAGCAACAACAGCAGCATCAAAACAGGAATCATGATTTGAATAATAGTGGTAGGAACAATGGACACACACCTGGTATGCAAATTGGTTCTTCTAGTTGA 1104 0.4112 MQPTKEVASTAANLNMLNHQQQFLRGLPQQQQQLPMPQIPVQFQQQKNILPIYQSGVCAKKMQEFVHCQQRRPADNNIIFWKRFVAEFFAPNGKKSFCFSLYPRTKTRANFPLGGMKKCDICKKNPVNGYEVCFDVLPRLLMVKYESGLLEERLFTDIPCEFRDPSGYIVLVCKKARRESLFHKFHVVHEGSIRIVFSPYIKICSWEFCVTRHEVFISRRHLVPNVNQIGDAISKFRDFAANNNDNNNVAAEEFQESSSKLVAVTQELAKKLEVPMLDDYSGFAKSYVRCLQLSEVGNFMKDMIDFSIRNKIAPIESLAKFPKKLRIADHGEDQLQQQQQHQNRNHDLNNSGRNNGHTPGMQIGSSS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01042 367 Pfam LIM-domain binding protein 64 318 IPR029005 -
Aip09g01042 367 PANTHER TRANSCRIPTIONAL COREPRESSOR SEUSS-LIKE ISOFORM X1 13 350 - -
Aip09g01042 367 PANTHER LIM DOMAIN-BINDING PROTEIN 13 350 IPR029005 -
Aip09g01042 367 MobiDBLite consensus disorder prediction 333 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01042 Aip-Chr9 14790595 14791698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01042 51 324 C2H2 Transcription Factor Family AT1G43850 48.727 1.22e-82 267