Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01021 ATGAGATTTTTACCATCCGATAATGCCGGGGGGAGGGGGTTTGCACCGAAATTGATTTCAATTGTGGGGCTCCCGAATGGTTTTGTGGAGCCTAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCGCAGGATGGTGACGATGGAATGAGCGGCGAAACTGTGCCGGTAGAGGACGCAGAAGCGATGGACTCGTCCGCCGCAGATGCAGACATAGATGCAGAAGCAGGAGTGAGGATTGTTGAAGGGATAGGATCCTTTGGCGCGATTGAATTTTCTTCCCTCACAGCCAAGGACGTCCTTACAACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATTCGGTCGCATCAAGGGATTCTCGGTCAGGAGGTCTAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAGAGCGAAATAATTTGGCAGATATTCATGTGCTCGAGGGAAGGGGAGCGAGACGGGAAACACATGCAGCGGAAAGACAGGAAGAAGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGCTGATGATGCCAGCGGGCGATGGTTTGTTGAACAATTCTGTGACAACCACAATCATCCCATGCTGGATGCGAGGTTTAGGGGAGGATTCGAGACTGTCGGGTTCGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGGCAGGCGCGACAGATGCGGAGTCCGCGTTGAAGTTCTTGGGAACTTTAAGGACGACTGATTCCGGGATATTCTGGAGGTACTCGCTGGATGTTGACAAGAGGCTGGAAAATCTCTTCTGGTACGATCGTACAAGTCGTTATGACTACAGCGTGTTCGGGGATGTCCTGGGTTTTGATGCAACTTACGGTCGTAACAAATACAAGTGCCCTTTGGTAATATTCTCAGGGGTGGAACATCATATGAGGACGGTGGTGTTCGGCTGTGCCATATTGAGCAACGAGAGCAAAGCAAGCTATGTGTGGTTGCTGCGGTCATTCCTTGAGGCAATGAAGGGAAAACAGCCGAAGTCTGTCACCACGGACGGTGACCTCGCCATGAAGAGTGCGGTTAGCATAGTTTTTCCCGATGCACATCACAGGTTGTGTAGCTGGCATTTGTTAAGGAACGCCACTGTTAGAGTTGGACGACCGGGTTTTCTCAGGAAATTCCATTTATGCCTCATGGGAGATCTAGAGGTTGACGAATTTGAGACAATATGGACGGATAACGTGGCGGACCACGAGTTGGAGGATCATTTGTGGATAGTGGAGATGTATGCCAAGAAGCATTCCTGGTCCAATGCCCATATCCGGGGAAAATTCTTCGCAGGTCTGAAGATGACATCCAGGTGCGAGGCTTTGAATATGCAGCTTGAAAAATTTATACACAACGGGTACAATCTAAGGGAGTTTGTGGAGCACTTCCAACACTATTTGGAGTTCATGAGGAGGAGAGAACTAGTGGCAGACTACAAGTTTGCGTATGGCGAGCCTGTTGTGAAGACGAAACTCGAGGCCATTGAGCAGTTCGCTGCAACGGTTTATACAAGAGAGGTTTTCAAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAACGTTAGAGTTGTGTCCACGAAGAGGACGAGCGCTTGTGTTTTGTTCGAGGTTGCAATGTACTGCAAGCAGAGATCATGGGCCGTGTCCTGGGCTGAGGAAGATGATGAATTCAGCTGTTCTTGTCAGTGGATGGAGTCCTTTGGGCTTCCTTGTGTCCACATGGTTGGGGTTCTGGTTTATCTGAACATGACAACTATCCCCAAAGGCCTAATACTTGACCGGTGGGCAAAGAGGACAAAGCAGCCACGTGCACCCTGCGACAAAACTCGTGTTGGGGAGATCCCAGACGCGGCATACATGAGCATGCACGCGGCGATGCTGGATGATTGCAGGGAGCTGGTGAGCCTGTCTTGCTGGTTTTTTGAGGACTACGTGGATGTGAAAACAAGGTTGGCAAAGGAGCGTCAATCCCTGCGGGACAAACATCGCCAAAGGTTGGGTGTTCCTGAGGAGGCCAGCAGGGTGTCTGTTCGGGATCCGATGCGGGCAAGGTACAAAGGATGCGGTCGAAGAGTTGTTACCTCTTGA 2151 0.5077 MRFLPSDNAGGRGFAPKLISIVGLPNGFVEPSYEFSSNFDRVHASQDGDDGMSGETVPVEDAEAMDSSAADADIDAEAGVRIVEGIGSFGAIEFSSLTAKDVLTTEFTSLQAAYDYYNEFGRIKGFSVRRSKVGRRTKQGAESEIIWQIFMCSREGERDGKHMQRKDRKKDPRPITRCGCEARIKVHADDASGRWFVEQFCDNHNHPMLDARFRGGFETVGFEIKDIYNAIEKQRRAGATDAESALKFLGTLRTTDSGIFWRYSLDVDKRLENLFWYDRTSRYDYSVFGDVLGFDATYGRNKYKCPLVIFSGVEHHMRTVVFGCAILSNESKASYVWLLRSFLEAMKGKQPKSVTTDGDLAMKSAVSIVFPDAHHRLCSWHLLRNATVRVGRPGFLRKFHLCLMGDLEVDEFETIWTDNVADHELEDHLWIVEMYAKKHSWSNAHIRGKFFAGLKMTSRCEALNMQLEKFIHNGYNLREFVEHFQHYLEFMRRRELVADYKFAYGEPVVKTKLEAIEQFAATVYTREVFKLFREVLMLASNVRVVSTKRTSACVLFEVAMYCKQRSWAVSWAEEDDEFSCSCQWMESFGLPCVHMVGVLVYLNMTTIPKGLILDRWAKRTKQPRAPCDKTRVGEIPDAAYMSMHAAMLDDCRELVSLSCWFFEDYVDVKTRLAKERQSLRDKHRQRLGVPEEASRVSVRDPMRARYKGCGRRVVTS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01021 716 PANTHER OS02G0262500 PROTEIN 101 209 - -
Aip09g01021 716 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 101 209 IPR031052 GO:0006355
Aip09g01021 716 Pfam MULE transposase domain 291 385 IPR018289 -
Aip09g01021 716 Pfam SWIM zinc finger 579 602 IPR007527 GO:0008270
Aip09g01021 716 ProSiteProfiles Zinc finger SWIM-type profile. 567 603 IPR007527 GO:0008270
Aip09g01021 716 PANTHER OS02G0262500 PROTEIN 229 673 - -
Aip09g01021 716 Pfam FAR1 DNA-binding domain 115 209 IPR004330 -
Aip09g01021 716 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 229 673 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01021 Aip-Chr9 14503782 14506389 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01021 FAR1 2.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01021 - - ahf:112777976 1383.24