Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00995 ATGCAGAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCCCTTGTCATGAAGAGTGGCAAGTACACCCTCGGTTATAAGACCGTTCTCAAATCCCTCAGAACCTCCAAAGGTAAGTTGATTATCATTGCTAACAACTGTCCACCTTTGAGGAAGTCAGAAATTGAGTACTATGCCATGTTGGCAAAGGTGGGAGTGCACCATTACAATGGGAACAACGTTGACTTGGGCACTGCATGTGGAAAATATTATAGAGTTTGCTGCCTTAGCATTATTGATCCTGGTGATTCTGATATCATTAAGACACTGCCTGGCGAACAGTAA 324 0.4414 MQKKTHESINNRLALVMKSGKYTLGYKTVLKSLRTSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00995 107 SUPERFAMILY L30e-like 8 101 IPR029064 -
Aip09g00995 107 ProSitePatterns Ribosomal protein L30e signature 2. 75 95 IPR022991 -
Aip09g00995 107 Gene3D - 1 103 IPR029064 -
Aip09g00995 107 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 100 IPR004038 -
Aip09g00995 107 PANTHER RIBOSOMAL PROTEIN L30E-RELATED 2 107 - -
Aip09g00995 107 PANTHER RIBOSOMAL PROTEIN L30 2 107 IPR039109 GO:0003723
Aip09g00995 107 ProSitePatterns Ribosomal protein L30e signature 1. 19 43 IPR022991 -
Aip09g00995 107 Hamap 50S ribosomal protein L30e [rpl30e]. 7 104 IPR000231 GO:0003723|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00995 Aip-Chr9 13937301 13938523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00995 3 107 Cytoplasmic Ribosomal Protein Gene Family AT3G18740 86.667 2.59e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00995 K02908 - gmx:100806260 216.468