Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00993 ATGGATCCACCGCTTTGTGTCAATGGTTGCGGTTTCTATGGTTCTGCTGCCAACAACAATCTTTGCTCAAAGTGTTACAAAGATCACATCAAAGAAACCTTCATCATCATTGAATCAGAAAGCAATAATAATAATAATGGAACATTATTATTAGATGATACCAAATCTCATGATGAACCACCATTAGCTGATGTGTTTGAAAGATTTACCAAAGACCTTGGTGCAACGGTTGATGATATTTCTAACAACAACAAGAAGAATGAGATAAAGAAAAGGTGCAAGAGGTGCAATAAAAAAGTTGGATTAACAGGGTTTGAGTGTCGATGTGGAGATTTATTTTGTGGAAAGCATAGGATACAGAGCGATTTACGAAGAAAGAGTACTCGGGATAATATGCTACAGAGACCTGGGCCACCAACCTGCCCAGATCCGAAACAGAAAACCTATTTCCAATCCGATCCGAATTTCACTTGCAGGTGCTCCCCTTGGCAAATCAGTCGTCCTCTTCTGTTCACCATAACAACACCCAATCGTCCTCGCATTCCTCGCCGGCACGACCTCGCCGTCCTCCCATTGCCATAA 582 0.4175 MDPPLCVNGCGFYGSAANNNLCSKCYKDHIKETFIIIESESNNNNNGTLLLDDTKSHDEPPLADVFERFTKDLGATVDDISNNNKKNEIKKRCKRCNKKVGLTGFECRCGDLFCGKHRIQSDLRRKSTRDNMLQRPGPPTCPDPKQKTYFQSDPNFTCRCSPWQISRPLLFTITTPNRPRIPRRHDLAVLPLP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00993 193 Gene3D - 1 48 - -
Aip09g00993 193 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Aip09g00993 193 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 32 - -
Aip09g00993 193 SMART AN1_Zf_4 93 124 IPR000058 GO:0008270
Aip09g00993 193 Gene3D - 77 123 IPR035896 -
Aip09g00993 193 SUPERFAMILY AN1-like Zinc finger 81 120 IPR035896 -
Aip09g00993 193 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 119 - -
Aip09g00993 193 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 4 3 119 - -
Aip09g00993 193 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Aip09g00993 193 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Aip09g00993 193 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00993 Aip-Chr9 13921788 13923489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00993 5 118 C2H2 Transcription Factor Family AT3G52800 33.607 4.89e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00993 - - adu:110276973 187.578