Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00986 ATGGAAAGATACAAAATTTTGAAAGAGCTTGGAGATGGTTCTTGCGGTCATGTATATAAAGCCCATGATACCAGAACTAATGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATGTAAGAGAAGTTAAGGCCCTCCGTAAGATGAATCACCCAAATATCATAAAATTGAGAGAGGTTATAAGCGAGAATAATGAATTGTTTTTCATTTTTGACTACATGGACTGTAATCTTTATCAATTAATAAAAGACAGAGAAAAGCCCTTTTCAGAGGAAGGGATAAGGCGCTTCATGAAGCAAGTGCTACAAGGACTTAGCCACATGCACAAGAGAGGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTCGTGACAAATGATGTTATTAAAATTGCTGATTTTGGCTTGGCTAGAGAAGTATCGTCGATGCCTCCTTACACTCAATATGTTTCTACCCGGTGGTACCGAGCTCCTGAAGTTTTGTTACAATCCCCATGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCAATATTAGCTGAGCTTTTCACTTTGACCCCCATATTTCCGGGTGAAAGTGAGATAGATCAAATGTACAAAATATACCATGTTCTTGGTACCCCAGATTTAGCTGCTTTCCCCATGGGCACAAACAATTCTCTGCTGTTGGAACTTGTAGGTCATGAATTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCTTGGAAGCTATAGATTTTATCTCACAACTCTTATCATGGGACCCATCAAGAAGACCAGATGCAAATCAGTCATTGCAACATCCTTTTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAA 888 0.375 MERYKILKELGDGSCGHVYKAHDTRTNEIVAVKRLKRKFCFWEEYTNVREVKALRKMNHPNIIKLREVISENNELFFIFDYMDCNLYQLIKDREKPFSEEGIRRFMKQVLQGLSHMHKRGFFHRDLKPENLLVTNDVIKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQMYKIYHVLGTPDLAAFPMGTNNSLLLELVGHEFVPPMKLSDIIPNASLEAIDFISQLLSWDPSRRPDANQSLQHPFFXXXXXXXXXXX 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00986 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Aip09g00986 295 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Aip09g00986 295 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 288 - -
Aip09g00986 295 CDD STKc_MAK_like 4 284 - -
Aip09g00986 295 SUPERFAMILY Protein kinase-like (PK-like) 1 286 IPR011009 -
Aip09g00986 295 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00986 295 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00986 295 Gene3D Transferase(Phosphotransferase) domain 1 83 291 - -
Aip09g00986 295 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 288 - -
Aip09g00986 295 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00986 Aip-Chr9 13795333 13803726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00986 1 284 Core Cell Cycle Gene Families AT3G48750 37.075 7.88e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip09g00986 Pkinase 9.5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00986 K08829 K08830 gmx:100792842 505.753