Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00973 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGGAAGTATGAGCTTGGGCGCCAGCCAGCCAACACTAAGTTATCGAGCAATAAGACGGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACCGGAAACTATTCATGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCAAACAATGAGCTCGTGAGAACTCAGACTCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCCCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACAGCTGCTGCCAAGAAGGATGCTGAGGAAGGTGAGACCCCCACGGAGGAAGCCAAGAAAAGCAACCATGTGCAGAGAAAAATCGAGAAACGTCAGAAAGATCGTAAGCTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTATATTTTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAAATCCAGAAGAAGAAGGGAAAGGGTGCTGCCTAA 654 0.4786 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAEEGETPTEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00973 217 MobiDBLite consensus disorder prediction 131 167 - -
Aip09g00973 217 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Aip09g00973 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Aip09g00973 217 CDD Ribosomal_S8e_like 5 196 - -
Aip09g00973 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Aip09g00973 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Aip09g00973 217 MobiDBLite consensus disorder prediction 1 22 - -
Aip09g00973 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Aip09g00973 217 Gene3D - 27 212 - -
Aip09g00973 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00973 Aip-Chr9 13533179 13535634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00973 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.854 1.89e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00973 K02995 - rcu:8277586 376.711