Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00969 ATGGAAAACCAATTCTTTCTGAATGGTGGCATGTCCCATCACCAGCACCATCCAATTCATCAGTTTGAAACCGCTTCAATGCAAACAACATGGCGTCATCATTCGTCATCATCATCATCCATGGAAATTCATCAACAAAATAATGTTGCAAATTGCTCACCTGAGAATAATAATCACCAAAATCAAGATTCCTTCTACAACAACAACAACACTGATCATAACAACCTTCAATTTGACTCCTCAGCTTTGAGCTCAATGGTTTCATCTCCATCAACAGCAGCACCGAATTTCAACATGATCCAAAACGACAACAGTTTCGTCATAAGAGAACTCATCGGAAAATTAGGAACAATTGGAGGAAGCTCCGCTGAGATCTCGCCACATTCTCAAACCGTCGCTCTTTACAACAACAATAACACTACTCCTTCTTCGTCGTGTTATAGCACGCCGTTGAACTCTCCTCCGAAGCTCAACATGCCGAAACCGCCGCCACCGTCATCATCAATGGCTCTGAATTCAGCAACCGTCGCTGAATTCTCAGCTGATCCTGGTTTCGCTGAAAGAGCCGCCAAGTTCTCTTGCTTCGGAAGCAGAAGCTTCAATGGAAGAACAACCACAACAACAACAACCACTACTACTTCTCCATTAGTCATGATAAACAATCACAACAACAACAATGGCGCAGAGTTGACTCATCAGAGATCTAATCCAATTCATCGAGTCTCGAGTAGTCCATCGCTGAAATCGCTTGGATCTCAAATGGAGAAGATTTGTTCTTCTCCTTTAGAAATGGCTGCGAATTCTTCTCAAGAGGAATCTACAATTTCAGAGCAGAATCCAAATGTGGAAGGTGCTGCTTTGAAAATCGCTTCTTCTTCTGACATGAGTTCAAGGAAAAGGAAAGGTTCTTCCAGAGCAAAAGCCAAAGACTCTACCAAGGGAGGTGAAGGTAGTGAAGAGTCAAATGCAAAGAGGAGCAAGGGAAATGAAGGTGAAGGAAATGAGAATAATGGGAGAGTGAAGGTAGAAGAAGAATCCAAAGGAGAAGAGAAACAACAACAGAACAACAAGAGTAACAACTCAAAGCCTCCAGAGCCACCAAAGGACTACATTCATGTCAGAGCCAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAACGTGTAAGGAGAGAGAAAATTAGTGAGAGAATGAAGCTTCTCCAAGATCTTGTACCAGGCTGCAATAAGGTCACTGGCAAAGCACTTATGCTTGATGAAATCATAAACTATGTTCAGTCATTGCAGCGCCAAGTTGAGTTCCTGTCTATGAAATTGGCTTCTGTTAACACAAGAATGGATCTTAGCATTGAGAACATTGTTCCAAAAGATATATTTCAATCAAATCATTCATTGGCACACCCAATTTTCCCAATAGATTCGTCAGCAACACCCTTTTATGGCCACCAATCCCAGCAAAACCCAGTTATCCACAATAACATTCCTAATGGTTCTTTGCCCCACAATTCAGTGGACCCATTAGATTCTGCTTTGTGCCAAACTCTTGGCATGCAATTACCTCAACTAAATGCCTTTAATGAAATTGGATCTCAGTATCCATTAACTTTCTGTGAGGATGACCTCCACACCATTGTTCAAATGGGATTTGGCCAAACTTCAAACAGGACAACACCAATTCATTCCCCAAGTTTCGACGGTAATAAACCACTAAATAATATGTCACATTCACTCGTTAATTGA 1743 0.4194 MENQFFLNGGMSHHQHHPIHQFETASMQTTWRHHSSSSSSMEIHQQNNVANCSPENNNHQNQDSFYNNNNTDHNNLQFDSSALSSMVSSPSTAAPNFNMIQNDNSFVIRELIGKLGTIGGSSAEISPHSQTVALYNNNNTTPSSSCYSTPLNSPPKLNMPKPPPPSSSMALNSATVAEFSADPGFAERAAKFSCFGSRSFNGRTTTTTTTTTTSPLVMINNHNNNNGAELTHQRSNPIHRVSSSPSLKSLGSQMEKICSSPLEMAANSSQEESTISEQNPNVEGAALKIASSSDMSSRKRKGSSRAKAKDSTKGGEGSEESNAKRSKGNEGEGNENNGRVKVEEESKGEEKQQQNNKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENIVPKDIFQSNHSLAHPIFPIDSSATPFYGHQSQQNPVIHNNIPNGSLPHNSVDPLDSALCQTLGMQLPQLNAFNEIGSQYPLTFCEDDLHTIVQMGFGQTSNRTTPIHSPSFDGNKPLNNMSHSLVN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00969 580 MobiDBLite consensus disorder prediction 224 370 - -
Aip09g00969 580 MobiDBLite consensus disorder prediction 224 281 - -
Aip09g00969 580 CDD bHLH_AtBPE_like 369 454 - -
Aip09g00969 580 Coils Coil 426 446 - -
Aip09g00969 580 PANTHER BHLH TRANSCRIPTION FACTOR 2 571 - -
Aip09g00969 580 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 377 448 IPR036638 GO:0046983
Aip09g00969 580 MobiDBLite consensus disorder prediction 294 352 - -
Aip09g00969 580 MobiDBLite consensus disorder prediction 552 580 - -
Aip09g00969 580 MobiDBLite consensus disorder prediction 142 170 - -
Aip09g00969 580 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 571 IPR024097 GO:0006355
Aip09g00969 580 Pfam Helix-loop-helix DNA-binding domain 383 430 IPR011598 GO:0046983
Aip09g00969 580 Gene3D - 376 451 IPR036638 GO:0046983
Aip09g00969 580 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 379 429 IPR011598 GO:0046983
Aip09g00969 580 SMART finulus 385 435 IPR011598 GO:0046983
Aip09g00969 580 MobiDBLite consensus disorder prediction 26 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00969 Aip-Chr9 13472033 13475701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00969 1 532 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 40.370 4.49e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip09g00969 HLH 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00969 - - gmx:100812081 545.428