Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00965 ATGCTTCGGTTGTTTTCATCTGGGTCTTATCTGTTTGAGTCATTTTCAAATCCCCCATTTATAAAAGCATTGCAAGTTTTTACGCATGCCACCTATTCGACCATTTGCCTAGCCCAACCTAAAGCTGAAAAGGAGGATCCTGCAGAGAAACCAATTAATGCTACTGAGGTTTTAAGTAAATGGGGTTGTAGTGATGGTGAATTGATGAGAATATTCACCCGTTGCCCAGCTTTGCGCAATGCTGATGCTACCAAAATCCAATCAAAACTTGATCTTCTGAGTGCTTTTGGAATAGGGGCATCTGATGTTGTTAAGATAGTCAATTGCAGGCCCCGGTTTTTCCAGTCTCGGATTAACCAATCTTTCAACGAGAGGCTTGCCTATTTCTTGTCATTGTTTGAGACGAAGGATTTGCTTACCAAAGCCATTGTGAGAAACCCTTCACTTTTGGTCTATGATGGTAGAGTTGACATTGAAGCTACCTTTGCACTCTATGAGGAGTTGGGTATTAAGAAAAGGGACTTGATTCAGATGATACTATTGCGTCCCACGATCATTTCAAGGACATCGTTCAACGATGATAAGATGGAATACATACGCAGGATAGGGCTTTCCAAGGATTCAAAGATGTATAAGTATGTGGTAACACTAATAGGTGTGTCACGTGTCGAAACAATTCGTGATAAGGTTGCGAATTTGGAGAAATTCGGTTTGTCTGAGGATGAGGTCTTTTGGCTTCTTGGGAAGTCCCCTCATATTTTGACATTGTCAACTGACAAGGTTCAGAGGAACATGACTTTCATTCTGGCCACAATGAAGCTCGATGTCAAGGCAATCTTAAGATGCCCATTGCTATTGTGTTTTAATATTGATACGGTTTTGAAGCCAAGAGTGCTTCTAGCAATGAAGGTACATGAGATTGATGGTGAGCAGAAAATCAGGAGACCTCCGATTCTTAGGGCACTCAGGATGACAGAAGAGAAGTTTGTGAATTTGTTTATCAAATGCCATGAGGAGGAAGTTGCCAATGAGTTAATGGAATTCTATAGAAGAACAAAAAATGTTAAGAGATTAGCTGAGTCATCAAAGAAGAGCGTTCGAAAAGGATTTCCTTTCTGA 1119 0.4066 MLRLFSSGSYLFESFSNPPFIKALQVFTHATYSTICLAQPKAEKEDPAEKPINATEVLSKWGCSDGELMRIFTRCPALRNADATKIQSKLDLLSAFGIGASDVVKIVNCRPRFFQSRINQSFNERLAYFLSLFETKDLLTKAIVRNPSLLVYDGRVDIEATFALYEELGIKKRDLIQMILLRPTIISRTSFNDDKMEYIRRIGLSKDSKMYKYVVTLIGVSRVETIRDKVANLEKFGLSEDEVFWLLGKSPHILTLSTDKVQRNMTFILATMKLDVKAILRCPLLLCFNIDTVLKPRVLLAMKVHEIDGEQKIRRPPILRALRMTEEKFVNLFIKCHEEEVANELMEFYRRTKNVKRLAESSKKSVRKGFPF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00965 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 176 205 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 Gene3D Transcription termination factor 3, mitochondrial 113 343 IPR038538 -
Aip09g00965 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 372 - -
Aip09g00965 372 Pfam mTERF 135 329 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 Pfam mTERF 56 149 IPR003690 GO:0003690|GO:0006355
Aip09g00965 372 PANTHER CGI-12 PROTEIN-RELATED 21 372 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip09g00965 mTERF 2.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00965 K15032 - gmx:100799629 476.863