Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00961 ATGATCGACCACGGCGACGGCATCTTACCGTCACTTGATTTCGAGAATCTGAAAGTAATAAGCGCCGTGGGGCGCGGGGCGAAGGGAGTGGTGTTCCTAGCGAGAGCCGGTGACCGGTCATGCAGCGAGTGTTTGGCTCTGAAGGCTATATCGAAGGCTCTGATTCAGAAGAAGGAAGAGGCTTACGGAGAGTATAAGAGGGTTTCATTCGAACTTGAAGTGCTACGTCGTTTTGATCACCCGCTTTTGCCGCGGTTGCGAGGGGTTTTGGAAACCGATGGAATCGTTGCCTTCGCCATGGATTTCTGCCACGGTGGCAACCTCCATTCTCTCAGGAAGAAACAAACTGAGAAAATGTTCGCCGATGACACCATCAGGTTTTACGCGGTGGAATTAGTCCTAGCTTTGGAGTACTTGCATGGTTTGGGAATAGTGTATAGAGACCTAAAGCCAGAAAATGTTATGATCCAAGAAAACGGTCACATAATGCTCGTAGATTTTGATCTCTCCAAGAAGCTGAAGCCAAAATCTCCTCAATCAACGAGTCACAAATCGTCGAGTCCTAACTCGTCGGCGAAGAAACCCGCAAGGAAGCGGCGGTTGTCGTGGCTTAACATAAACTGTAACTCTGGCATCTTGCCGTGCGAGTTGGACTCAGTAGAGCCGCAACCTGAGTCAACTCGTCGGGGTGAGTCAGACTCAGTGGAGAAATCGAACTCGTTCGTTGGAACGGAAGAGTACGTGGCACCTGAGGTTGTCGCAGGGCAGGGTCATGGTTTCGGTGTTGATTGGTGGTCACTCGGTGTCGTTTTGTATGAAATGTTATACGGAACGACGCCGTTTAAGGGCGAGAATAGAAAAGAAACGTTTCTTGGGATATTAACGAAGGAGCCTGAGCTGACGGGGGAGAAGACTGCGTTACGAGATTTGATTGGTAGGTTGTTAGAAAAGGATCCTGATCGTCGGATCACAGTTGGCGAGATCAAGAGTCATGATTTCTTTAAGGGAGTTAAGTGGGACACGGTGTTGCAAATAGCGAGACCACCTTATATTCCTTGTAATGAGGTTGAAGACGCAGTGGGGCTTAGCAAACAGGAAGTGGAGATTTTTGTTCATGGAGTGTTTTTTCCTGAGGGAAATGATGATAGAAGAGAGAAAAATGAGAAAGTGGAGGAAAAGAATGGTGGAAATGAGGAGAATAATAGTAACAAGAAAGTGTGGTCTGACAAGTTGAGTCATAGACCCACTCAGAATGATGATTTTTTAATTTTTTGA 1275 0.4714 MIDHGDGILPSLDFENLKVISAVGRGAKGVVFLARAGDRSCSECLALKAISKALIQKKEEAYGEYKRVSFELEVLRRFDHPLLPRLRGVLETDGIVAFAMDFCHGGNLHSLRKKQTEKMFADDTIRFYAVELVLALEYLHGLGIVYRDLKPENVMIQENGHIMLVDFDLSKKLKPKSPQSTSHKSSSPNSSAKKPARKRRLSWLNINCNSGILPCELDSVEPQPESTRRGESDSVEKSNSFVGTEEYVAPEVVAGQGHGFGVDWWSLGVVLYEMLYGTTPFKGENRKETFLGILTKEPELTGEKTALRDLIGRLLEKDPDRRITVGEIKSHDFFKGVKWDTVLQIARPPYIPCNEVEDAVGLSKQEVEIFVHGVFFPEGNDDRREKNEKVEEKNGGNEENNSNKKVWSDKLSHRPTQNDDFLIF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00961 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Aip09g00961 424 MobiDBLite consensus disorder prediction 173 197 - -
Aip09g00961 424 ProSiteProfiles Protein kinase domain profile. 17 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00961 424 MobiDBLite consensus disorder prediction 174 192 - -
Aip09g00961 424 SMART serkin_6 17 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00961 424 Gene3D Transferase(Phosphotransferase) domain 1 235 353 - -
Aip09g00961 424 Gene3D Transferase(Phosphotransferase) domain 1 107 180 - -
Aip09g00961 424 Gene3D Phosphorylase Kinase; domain 1 17 106 - -
Aip09g00961 424 MobiDBLite consensus disorder prediction 217 240 - -
Aip09g00961 424 SUPERFAMILY Protein kinase-like (PK-like) 15 357 IPR011009 -
Aip09g00961 424 PANTHER FLIPPASE KINASE 1-RELATED 10 397 - -
Aip09g00961 424 MobiDBLite consensus disorder prediction 380 424 - -
Aip09g00961 424 MobiDBLite consensus disorder prediction 380 416 - -
Aip09g00961 424 Pfam Protein kinase domain 19 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00961 424 Pfam Protein kinase domain 236 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g00961 424 ProSiteProfiles AGC-kinase C-terminal domain profile. 335 424 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip09g00961 424 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 10 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00961 Aip-Chr9 13276127 13278979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00961 9 375 AGC Kinase Gene Family AT4G13000 59.673 1.35e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip09g00961 Pkinase 6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00961 K20714 - gmx:100785773 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03000 06 124349117 124353939 Aip09g00961 09 13276127 13278979 PCT